RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 LY9Q9HBG7 655 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 SAGE1Q9NXZ1 904 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 LAMA4Q16363 1823 aa13.16□□□□□ -0.3
TRAPPC4-211ENST00000533012 FLOT1O75955 427 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 CPA1P15085 419 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 RBM25P49756 843 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 Q6ZUG5 572 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 CHURC1Q8WUH1 139 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 CHMP4CQ96CF2 233 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 TCEANC2Q96MN5 208 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 P2RX7Q99572 595 aaKnown RBP13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 ATAD5Q96QE3 1844 aa13.15□□□□□ -0.3
TRAPPC4-211ENST00000533012 MYH8P13535 1937 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 TMEM232C9JQI7 657 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 TLR2O60603 784 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 PDHBP11177 359 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 GCLCP48506 637 aaPredicted RBP13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 CRHR2Q13324 411 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 CFHR5Q9BXR6 569 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 UPF3BQ9BZI7 483 aaKnown RBP13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 SENP2Q9HC62 589 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
TRAPPC4-211ENST00000533012 PHIPQ8WWQ0 1821 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 PLA2G6O60733 806 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 PARP1P09874 1014 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 CALM1P0DP23 149 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 CALM2P0DP24 149 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 CALM3P0DP25 149 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 DSG3P32926 999 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 STAT2P52630 851 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 HERVK_113P62684 666 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 GPATCH4Q5T3I0 446 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 SGMS1Q86VZ5 419 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 PRPF38AQ8NAV1 312 aaKnown RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 NUP133Q8WUM0 1156 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 SLF1Q9BQI6 1058 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 GPCPD1Q9NPB8 672 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 GREB1LQ9C091 1923 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
TRAPPC4-211ENST00000533012 DDAH1O94760 285 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 NEK4P51957 841 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 TROAPQ12815 778 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 C17orf99Q6UX52 265 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 BRF1Q92994 677 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 KIFC2Q96AC6 838 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 AGXT2Q9BYV1 514 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 R3HDMLQ9H3Y0 253 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 FBXO28Q9NVF7 368 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 CPA4Q9UI42 421 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 PPP1R9AQ9ULJ8 1098 aa13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 CTDP1Q9Y5B0 961 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 FRMPD2Q68DX3 1309 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC4-211ENST00000533012 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 SPDYE16A6NNV3 312 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 GPR25O00155 361 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 ZBED4O75132 1171 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 HSPA1AP0DMV8 641 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 HSPA1BP0DMV9 641 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 FDX1P10109 184 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 KIF5BP33176 963 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 ANKRD1Q15327 319 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 LBX2Q6XYB7 198 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 ANKRD13CQ8N6S4 541 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 MB21D1Q8N884 522 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 GPRC5AQ8NFJ5 357 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 TSKSQ9UJT2 592 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 BRPF3Q9ULD4 1205 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
TRAPPC4-211ENST00000533012 THSD7BQ9C0I4 1608 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 PALM3A6NDB9 673 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 KLRF2D3W0D1 207 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 VWA5AO00534 786 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 ZBTB43O43298 467 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 SLC16A2P36021 539 aa13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-211ENST00000533012 GNAQP50148 359 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms