RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 FERMT3Q86UX7 667 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 CERS3Q8IU89 383 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 TBC1D10CQ8IV04 446 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 IFNL3Q8IZI9 196 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 KDF1Q8NAX2 398 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 PROCA1Q8NCQ7 364 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 IGDCC4Q8TDY8 1250 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 C8orf76Q96K31 380 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 LRRC2Q9BYS8 371 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 TNMDQ9H2S6 317 aa6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 CUEDC1Q9NWM3 386 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 ORC3Q9UBD5 711 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 CCDC9Q9Y3X0 531 aaKnown RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 DNMT3AQ9Y6K1 912 aaPredicted RBP6.64□□□□□ -1.35
ATPAF1-210ENST00000532925 LRRC37AA6NMS7 1700 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 LILRA1O75019 489 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 MBD4O95243 580 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 COL1A1P02452 1464 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 IFNAR1P17181 557 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 METAP2P50579 478 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 HAND2P61296 217 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM160A1Q05DH4 1040 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 NBPF20Q3BBV1 942 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FOXD4L6Q3SYB3 417 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FOXD4L3Q6VB84 417 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 CCDC73Q6ZRK6 1079 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FBXO33Q7Z6M2 555 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 ELOA2Q8IYF1 753 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM177A1Q8N128 213 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 MAGEB6Q8N7X4 407 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 JMYQ8N9B5 988 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 TDRD7Q8NHU6 1098 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 BICD2Q8TD16 824 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 FBXO41Q8TF61 875 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 DDX11Q96FC9 970 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 PGBD1Q96JS3 809 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 NLRP3Q96P20 1036 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 LY9Q9HBG7 655 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 EPB41L4AQ9HCS5 686 aaPredicted RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 SEC31BQ9NQW1 1179 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 DACT1Q9NYF0 836 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 USP21Q9UK80 565 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 MINPP1Q9UNW1 487 aa6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 RTCBQ9Y3I0 505 aaKnown RBP6.63□□□□□ -1.35
ATPAF1-210ENST00000532925 COL4A1P02462 1669 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 NEDD4P46934 1319 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 A0A0G2JLW4 131 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 FAM237AA0A1B0GTK4 181 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 ERICH2A1L162 156 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 GOLGA6L6A8MZA4 724 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 ERVH48-1M5A8F1 160 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 ZBTB43O43298 467 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 PPP6R2O75170 966 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 AP1G2O75843 785 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 LIG1P18858 919 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 U2AF2P26368 475 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 PTGIRP43119 386 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 RPS8P62241 208 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 TYRO3Q06418 890 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 GAS6Q14393 721 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 DHX8Q14562 1220 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 SKIV2LQ15477 1246 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 NTRK3Q16288 839 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 SARM1Q6SZW1 724 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 TPTE2Q6XPS3 522 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 SYNE3Q6ZMZ3 975 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 MFSD6Q6ZSS7 791 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 CYB5R4Q7L1T6 521 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 LINC00301Q8NCQ3 95 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 ENGASEQ8NFI3 743 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 MRPS27Q92552 414 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 TIGD1Q96MW7 591 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 USP28Q96RU2 1077 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 SETDB2Q96T68 719 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 HMX1Q9NP08 348 aaPredicted RBP6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 LRP2BPQ9P2M1 347 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 GPSM3Q9Y4H4 160 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 MRVI1Q9Y6F6 885 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 MYH2Q9UKX2 1941 aa6.62□□□□□ -1.35
ATPAF1-210ENST00000532925 TNRC6CQ9HCJ0 1690 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 IRS2Q9Y4H2 1338 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 BAZ2AQ9UIF9 1905 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CCDC69A6NI79 296 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 GOLGA8AA7E2F4 631 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 B4E1Z4 1266 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 ORC4O43929 436 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 KINO60870 393 aaKnown RBP6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 OFD1O75665 1012 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 DEXIO95424 95 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 APPP05067 770 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CALM1P0DP23 149 aa6.61□□□□□ -1.35
ATPAF1-210ENST00000532925 CALM2P0DP24 149 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms