RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 SH3RF3Q8TEJ3 882 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 BAG1Q99933 345 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 MCM9Q9NXL9 1143 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ADD3Q9UEY8 706 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 MAD2L2Q9UI95 211 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 SYNRGQ9UMZ2 1314 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 JAG2Q9Y219 1238 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 PPP2R2CQ9Y2T4 447 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 LEMD3Q9Y2U8 911 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 RTCBQ9Y3I0 505 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 SNED1Q8TER0 1413 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZSCAN12O43309 604 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 CYTH3O43739 400 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 H2AFXP16104 143 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 CDK11BP21127 795 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 FECHP22830 423 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 KIF5BP33176 963 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ADKP55263 362 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 NLRP5P59047 1200 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 TFAP4Q01664 338 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 TOGARAM2Q6ZUX3 1019 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 DZIP1Q86YF9 867 aaKnown RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 BLIDQ8IZY5 108 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 WDR66Q8TBY9 1149 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 DYNLL2Q96FJ2 89 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 CCDC34Q96HJ3 373 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 ZMYND15Q9H091 742 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 OGFRQ9NZT2 677 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 PCDHA4Q9UN74 947 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 PARP3Q9Y6F1 533 aa9.42□□□□□ -0.9
TRIM53BP-201ENST00000532912 LRRC10BA6NIK2 292 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 GTPBP6O43824 516 aaPredicted RBP9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 CALML3P27482 149 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 LONP1P36776 959 aaKnown RBP9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 STX17P56962 302 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 NFIXQ14938 502 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 IQUBQ8NA54 791 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 PANX2Q96RD6 677 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 PYM1Q9BRP8 204 aaKnown RBP9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 RTFDC1Q9BY42 306 aaPredicted RBP9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 KAT14Q9H8E8 782 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 DNAI1Q9UI46 699 aa9.41□□□□□ -0.9
TRIM53BP-201ENST00000532912 ITIH6Q6UXX5 1313 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 USP17L3A6NCW0 530 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 USP17L4A6NCW7 530 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 LDHBP07195 334 aaKnown RBP9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 RASA1P20936 1047 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 MCM7P33993 719 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 DIXDC1Q155Q3 683 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 ERCC6LQ2NKX8 1250 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 NAALADL2Q58DX5 795 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 USP17L1Q7RTZ2 530 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 STAMQ92783 540 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 GPKOWQ92917 476 aaPredicted RBP eCLIP9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 KIFC2Q96AC6 838 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 C8orf37Q96NL8 207 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 BLZF1Q9H2G9 400 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 LIMA1Q9UHB6 759 aaKnown RBP9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 PCDHA6Q9UN73 950 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 PCDHA8Q9Y5H6 950 aa9.4□□□□□ -0.9
TRIM53BP-201ENST00000532912 LTBP1Q14766 1721 aa9.4□□□□□ -0.91
TRIM53BP-201ENST00000532912 AKR1B15C9JRZ8 316 aaPredicted RBP9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 STXBP3O00186 592 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 MFAP3LO75121 409 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 TADA3O75528 432 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 NOVP48745 357 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 SLC4A8Q2Y0W8 1093 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 CRY2Q49AN0 593 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 KLHL10Q6JEL2 608 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 HOMER1Q86YM7 354 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 SLC44A5Q8NCS7 719 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 CERKQ8TCT0 537 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 RASGRP4Q8TDF6 673 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 CTAGE1Q96RT6 745 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 WDR24Q96S15 920 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 TMEM47Q9BQJ4 181 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 SRRTQ9BXP5 876 aaKnown RBP9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 BCL11BQ9C0K0 894 aaPredicted RBP9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 MRPL44Q9H9J2 332 aaKnown RBP9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 ZNF446Q9NWS9 450 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 RWDD2AQ9UIY3 292 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 UBR3Q6ZT12 1888 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 FOCADQ5VW36 1801 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 GYPCP04921 128 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 USP5P45974 858 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 GNAQP50148 359 aa9.39□□□□□ -0.91
TRIM53BP-201ENST00000532912 GSTO1P78417 241 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms