RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 PEX10O60683 326 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SLC1A4P43007 532 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 BLOC1S2Q6QNY1 142 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 KCTD1Q719H9 257 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PARK7Q99497 189 aaKnown RBP13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CPA4Q9UI42 421 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PNMA3Q9UL41 463 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 FLOT1O75955 427 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TMEM87BQ96K49 555 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
TRAF3IP2-212ENST00000532708 FRMPD2Q68DX3 1309 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 SH2B2O14492 632 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TLR2O60603 784 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ECM2O94769 699 aaPredicted RBP13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PDHBP11177 359 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 BMP3P12645 472 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 PSMA5P28066 241 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 HERVK_113P62684 666 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 COG2Q14746 738 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 GMCL1Q96IK5 515 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 BACH2Q9BYV9 841 aa13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 UPF3BQ9BZI7 483 aaKnown RBP13.97□□□□□ -0.17
TRAF3IP2-212ENST00000532708 RPS6KB1P23443 525 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CCDC96Q2M329 555 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ANKRD13CQ8N6S4 541 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 CFHR5Q9BXR6 569 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 GPCPD1Q9NPB8 672 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 ADGRA2Q96PE1 1338 aa13.96□□□□□ -0.17
TRAF3IP2-212ENST00000532708 TMEM232C9JQI7 657 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 HSPA8P11142 646 aaKnown RBP13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 LBX1P52954 281 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 TTBK2Q6IQ55 1244 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 NFXL1Q6ZNB6 911 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 Q6ZUG5 572 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 RUFY3Q7L099 469 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 DCAF4Q8WV16 495 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 MYL10Q9BUA6 226 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 C22orf23Q9BZE7 217 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 HOXC10Q9NYD6 342 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 RLFQ13129 1914 aa13.96□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 GPR25O00155 361 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 DSG3P32926 999 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SLC16A2P36021 539 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 ANAPC15P60006 121 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 FGD1P98174 961 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 RAB11FIP4Q86YS3 637 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 ATG4CQ96DT6 458 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 MTA3Q9BTC8 594 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 PAGR1Q9BTK6 254 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 TXNRD2Q9NNW7 524 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CYP46A1Q9Y6A2 500 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 WDR19Q8NEZ3 1342 aa13.95□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CCDC69A6NI79 296 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SNHG28P0DPA3 235 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 LIFRP42702 1097 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SLF1Q9BQI6 1058 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CPVLQ9H3G5 476 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 RBPJLQ9UBG7 517 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 PPP1R9AQ9ULJ8 1098 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 BCRP11274 1271 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 RXRAP19793 462 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 STAT2P52630 851 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 ZNF543Q08ER8 600 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CATIPQ7Z7H3 387 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 TMTC2Q8N394 836 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 ZNF296Q8WUU4 475 aaPredicted RBP13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 UPF2Q9HAU5 1272 aaKnown RBP13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 PARP14Q460N5 1801 aa13.94□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SNAP25P60880 206 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 TROAPQ12815 778 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 Q3C1V9 767 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 STAG2Q8N3U4 1231 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 PRPF38AQ8NAV1 312 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 BRF1Q92994 677 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 UBA5Q9GZZ9 404 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 BTBD7Q9P203 1132 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 BRPF3Q9ULD4 1205 aa13.93□□□□□ -0.18
TRAF3IP2-212ENST00000532708 VWA5AO00534 786 aa13.92□□□□□ -0.18
TRAF3IP2-212ENST00000532708 CNMDO75829 334 aa13.92□□□□□ -0.18
TRAF3IP2-212ENST00000532708 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SP3Q02447 781 aa13.92□□□□□ -0.18
TRAF3IP2-212ENST00000532708 APOBRQ0VD83 1088 aa13.92□□□□□ -0.18
TRAF3IP2-212ENST00000532708 SGMS1Q86VZ5 419 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms