RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 QSER1Q2KHR3 1735 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 RAD21O60216 631 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 ZDHHC15Q96MV8 337 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
SRPRA-206ENST00000532259 KRBA2Q6ZNG9 492 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 FAM198AQ9UFP1 575 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 SERTAD1Q9UHV2 236 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 CEP131Q9UPN4 1083 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 A0A087X0B3 334 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 FAM237AA0A1B0GTK4 181 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 VWA3AA6NCI4 1184 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 PARP1P09874 1014 aaKnown RBP17.39■□□□□ 0.37
SRPRA-206ENST00000532259 ZNF75DP51815 510 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 PTGDRQ13258 359 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 SH3BP5LQ7L8J4 393 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 FAM13BQ9NYF5 915 aa17.39■□□□□ 0.37
SRPRA-206ENST00000532259 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SRPRA-206ENST00000532259 PRR29P0C7W0 189 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 TOP1P11387 765 aaKnown RBP17.38■□□□□ 0.37
SRPRA-206ENST00000532259 DPEP1P16444 411 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 PTGS1P23219 599 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 ZSCAN29Q8IWY8 852 aaPredicted RBP17.38■□□□□ 0.37
SRPRA-206ENST00000532259 TDRD3Q9H7E2 651 aaKnown RBP17.38■□□□□ 0.37
SRPRA-206ENST00000532259 KCNA3P22001 575 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 BLIDQ8IZY5 108 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 DHX58Q96C10 678 aa17.38■□□□□ 0.37
SRPRA-206ENST00000532259 STXBP3O00186 592 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 CASP1P29466 404 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 SF3B2Q13435 895 aaKnown RBP17.37■□□□□ 0.37
SRPRA-206ENST00000532259 PIGSQ96S52 555 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
SRPRA-206ENST00000532259 PCDHA5Q9Y5H7 936 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 RAD17O75943 681 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 PDHBP11177 359 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 BAG6P46379 1132 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 NOVP48745 357 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 GNAQP50148 359 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 NLRP12P59046 1061 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 NAT10Q9H0A0 1025 aaKnown RBP17.37■□□□□ 0.37
SRPRA-206ENST00000532259 GPCPD1Q9NPB8 672 aa17.37■□□□□ 0.37
SRPRA-206ENST00000532259 CDC25AP30304 524 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 IL17AQ16552 155 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 CCDC186Q7Z3E2 898 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 PLA2G4DQ86XP0 818 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 SYMPKQ92797 1274 aaKnown RBP17.36■□□□□ 0.37
SRPRA-206ENST00000532259 PRMT6Q96LA8 375 aaPredicted RBP17.36■□□□□ 0.37
SRPRA-206ENST00000532259 TIGD1Q96MW7 591 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 KCNF1Q9H3M0 494 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 PCDHA4Q9UN74 947 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 ZNF646O15015 1829 aaPredicted RBP17.36■□□□□ 0.37
SRPRA-206ENST00000532259 IGKV6D-41A0A0C4DH26 115 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 ZBTB7AO95365 584 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 CAVIN2O95810 425 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 AFMP43652 599 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 HSP90AA4PQ58FG1 418 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 TTLL6Q8N841 843 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 STAMQ92783 540 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 BARHL2Q9NY43 387 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 PCDHA6Q9UN73 950 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 PCDHA8Q9Y5H6 950 aa17.36■□□□□ 0.37
SRPRA-206ENST00000532259 M0R2N6 131 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-206ENST00000532259 INF2Q27J81 1249 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-206ENST00000532259 COL4A5P29400 1685 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 BMP6P22004 513 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 NAPAP54920 295 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 LRMPQ12912 555 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 CCDC125Q86Z20 511 aa17.35■□□□□ 0.37
SRPRA-206ENST00000532259 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
SRPRA-206ENST00000532259 MYH8P13535 1937 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 HLA-DOAP06340 250 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
SRPRA-206ENST00000532259 SLC16A2P36021 539 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 NT5C2P49902 561 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 SPZ1Q9BXG8 430 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 TUBE1Q9UJT0 475 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
SRPRA-206ENST00000532259 CALML3P27482 149 aa17.33■□□□□ 0.37
SRPRA-206ENST00000532259 POSTNQ15063 836 aa17.33■□□□□ 0.37
SRPRA-206ENST00000532259 CFAP100Q494V2 611 aa17.33■□□□□ 0.37
SRPRA-206ENST00000532259 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.33■□□□□ 0.37
SRPRA-206ENST00000532259 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.37
SRPRA-206ENST00000532259 PLIN4Q96Q06 1357 aa17.33■□□□□ 0.36
SRPRA-206ENST00000532259 ACTN4O43707 911 aaKnown RBP17.33■□□□□ 0.36
SRPRA-206ENST00000532259 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.36
SRPRA-206ENST00000532259 CCDC144BQ3MJ40 725 aa17.33■□□□□ 0.36
SRPRA-206ENST00000532259 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
SRPRA-206ENST00000532259 ZNF579Q8NAF0 562 aaKnown RBP17.33■□□□□ 0.36
SRPRA-206ENST00000532259 COA7Q96BR5 231 aa17.33■□□□□ 0.36
SRPRA-206ENST00000532259 SIPA1L1O43166 1804 aa17.33■□□□□ 0.36
SRPRA-206ENST00000532259 GDF11O95390 407 aa17.32■□□□□ 0.36
SRPRA-206ENST00000532259 TTLL1O95922 423 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms