RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 UBAC1Q9BSL1 405 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 WDR18Q9BV38 432 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 AGXT2Q9BYV1 514 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 IL17RBQ9NRM6 502 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 TLL2Q9Y6L7 1015 aa14.7□□□□□ -0.06
COPB1-208ENST00000532088 SPDYE5A6NIY4 337 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 PRC1O43663 620 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 TTLL1O95922 423 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 PTPRAP18433 802 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 FECHP22830 423 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 LIFRP42702 1097 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 PRSS12P56730 875 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 JAG1P78504 1218 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 ICA1Q05084 483 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 SEPT2Q15019 361 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 SEC23AQ15436 765 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 SAPCD2Q86UD0 394 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 SH2D4AQ9H788 454 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 ARHGEF10LQ9HCE6 1279 aa14.69□□□□□ -0.06
COPB1-208ENST00000532088 TNKSO95271 1327 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 UBE2Q2LH0YL09 131 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 APLP1P51693 650 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 PPIL2Q13356 520 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 ANKRD1Q15327 319 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 MOB2Q70IA6 237 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 SGMS1Q86VZ5 419 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 TTC13Q8NBP0 860 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 IGDCC4Q8TDY8 1250 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 FZD1Q9UP38 647 aa14.68□□□□□ -0.06
COPB1-208ENST00000532088 SH2B2O14492 632 aaPredicted RBP14.67□□□□□ -0.06
COPB1-208ENST00000532088 CXCL11O14625 94 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 IFIT3O14879 490 aaKnown RBP14.67□□□□□ -0.06
COPB1-208ENST00000532088 ZBTB48P10074 688 aaPredicted RBP14.67□□□□□ -0.06
COPB1-208ENST00000532088 TOP1P11387 765 aaKnown RBP14.67□□□□□ -0.06
COPB1-208ENST00000532088 RCAN1P53805 252 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 HUNKP57058 714 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 WTAPQ15007 396 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 RAB3GAP1Q15042 981 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 TMEM67Q5HYA8 995 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 RCSD1Q6JBY9 416 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 ENAHQ8N8S7 591 aaPredicted RBP14.67□□□□□ -0.06
COPB1-208ENST00000532088 ZNF280CQ8ND82 737 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 SLC10A4Q96EP9 437 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 ZBED2Q9BTP6 218 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 SLC4A5Q9BY07 1137 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 PDRG1Q9NUG6 133 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 TMX2Q9Y320 296 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 AFG3L2Q9Y4W6 797 aa14.67□□□□□ -0.06
COPB1-208ENST00000532088 PHIPQ8WWQ0 1821 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 C19orf81C9J6K1 198 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
COPB1-208ENST00000532088 USP14P54578 494 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 EVCP57679 992 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 SHROOM1Q2M3G4 852 aaPredicted RBP14.66□□□□□ -0.06
COPB1-208ENST00000532088 IFIT1BQ5T764 474 aaKnown RBP14.66□□□□□ -0.06
COPB1-208ENST00000532088 DMRTA1Q5VZB9 504 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 SIAH1Q8IUQ4 282 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 GMCL1P1Q8NEA9 526 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 UPF3BQ9BZI7 483 aaKnown RBP14.66□□□□□ -0.06
COPB1-208ENST00000532088 KIAA1683Q9H0B3 1180 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 LY9Q9HBG7 655 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 KCNH4Q9UQ05 1017 aa14.66□□□□□ -0.06
COPB1-208ENST00000532088 USP17L10C9JJH3 530 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 NMT2O60551 498 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 NEK4P51957 841 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 COL9A3Q14050 684 aaPredicted RBP14.65□□□□□ -0.06
COPB1-208ENST00000532088 SH3D19Q5HYK7 790 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 RGMBQ6NW40 437 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 CCDC102AQ96A19 550 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 CLMNQ96JQ2 1002 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 C12orf42Q96LP6 360 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 MAP3K14Q99558 947 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 ELP3Q9H9T3 547 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
COPB1-208ENST00000532088 RASSF10A6NK89 507 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 MCM2P49736 904 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 BACE1P56817 501 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 MAP2K5Q13163 448 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 PADI6Q6TGC4 694 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 Q6ZUG5 572 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 CHST3Q7LGC8 479 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 LPAR1Q92633 364 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 OPTNQ96CV9 577 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 WNK4Q96J92 1243 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 TMEM47Q9BQJ4 181 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 KAT14Q9H8E8 782 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 CLIP2Q9UDT6 1046 aa14.64□□□□□ -0.07
COPB1-208ENST00000532088 ABT1Q9ULW3 272 aaKnown RBP14.64□□□□□ -0.07
COPB1-208ENST00000532088 NID2Q14112 1375 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 DDAH1O94760 285 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 SLC10A3P09131 477 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 CALM1P0DP23 149 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 CALM2P0DP24 149 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 CALM3P0DP25 149 aa14.63□□□□□ -0.07
COPB1-208ENST00000532088 CPA1P15085 419 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms