RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 PAF1Q8N7H5 531 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 STK35Q8TDR2 534 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 RUNDC1Q96C34 613 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 NSUN5Q96P11 429 aaKnown RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 POP1Q99575 1024 aaKnown RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 MTFR1LQ9H019 292 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 RASSF4Q9H2L5 321 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 RUBCNLQ9H714 662 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 MARK1Q9P0L2 795 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 TAGLN3Q9UI15 199 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 RCAN3Q9UKA8 241 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 CNTNAP5Q8WYK1 1306 aa5.47□□□□□ -1.53
AC055878.1-201ENST00000531858 VSTM5A8MXK1 200 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 OPA1O60313 960 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 TCEA3O75764 348 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 CT47B1P0C2W7 299 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 CYP2C19P33261 490 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 ZNF280AP59817 542 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 TNP2Q05952 138 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 WIPI1Q5MNZ9 446 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 WDR78Q5VTH9 848 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 MAP1SQ66K74 1059 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 TOGARAM2Q6ZUX3 1019 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 FCHSD1Q86WN1 690 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 CRACR2BQ8N4Y2 399 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 TEX19Q8NA77 164 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 MYRIPQ8NFW9 859 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 NUP88Q99567 741 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 CCDC8Q9H0W5 538 aaPredicted RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 ATG3Q9NT62 314 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 LRP2BPQ9P2M1 347 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 NOB1Q9ULX3 412 aaKnown RBP5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 PCDHB10Q9UN67 800 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 PCDHA4Q9UN74 947 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 GIT1Q9Y2X7 761 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 TNKSO95271 1327 aa5.46□□□□□ -1.54
AC055878.1-201ENST00000531858 EXOC5O00471 708 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SNUPNO95149 360 aaKnown RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 C6orf222P0C671 652 aaPredicted RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 ESRRAP11474 423 aaPredicted RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 RAG1P15918 1043 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 BAG6P46379 1132 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SCNN1BP51168 640 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 GJA9P57773 515 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 PCBP1Q15365 356 aaKnown RBP eCLIP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 FAM83BQ5T0W9 1011 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 FAM182BQ5T319 152 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 LHFPL2Q6ZUX7 228 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 MAMDC2Q7Z304 686 aaPredicted RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 BRAPQ7Z569 592 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 ZNF227Q86WZ6 799 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SLFN12Q8IYM2 578 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SLC7A14Q8TBB6 771 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 PI4K2BQ8TCG2 481 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 PTPRN2Q92932 1015 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 OSBP2Q969R2 916 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 AIFM3Q96NN9 605 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 ELAC2Q9BQ52 826 aaKnown RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 HERPUD2Q9BSE4 406 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 TRIM8Q9BZR9 551 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SUCOQ9UBS9 1254 aaKnown RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 SUSD2Q9UGT4 822 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 LZTS1Q9Y250 596 aa5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 TNPO3Q9Y5L0 923 aaKnown RBP5.45□□□□□ -1.54
AC055878.1-201ENST00000531858 ULK1O75385 1050 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 MYL3P08590 195 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 MAPTP10636 758 aaKnown RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 PYGMP11217 842 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 RHOQP17081 205 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 LIG1P18858 919 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 RECQLP46063 649 aaPredicted RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 TRAPPC10P48553 1259 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 YARSP54577 528 aaKnown RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 CABP4P57796 275 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 TMPRSS15P98073 1019 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 IKBKEQ14164 716 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 SAFBQ15424 915 aaKnown RBP eCLIP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 CFAP100Q494V2 611 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 EFCAB2Q5VUJ9 269 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 YOD1Q5VVQ6 348 aaPredicted RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 HEATR6Q6AI08 1181 aaKnown RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 CCDC70Q6NSX1 233 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 POMZP3Q6PJE2 187 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 CYFIP1Q7L576 1253 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 NEDD1Q8NHV4 660 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 USP33Q8TEY7 942 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 PLPPR2Q96GM1 343 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 MAGEB10Q96LZ2 347 aaPredicted RBP5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 CCDC140Q96MF4 163 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 GBP3Q9H0R5 595 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 GPAMQ9HCL2 828 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 OSGEPQ9NPF4 335 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 MAN1C1Q9NR34 630 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 NDOR1Q9UHB4 597 aa5.44□□□□□ -1.54
AC055878.1-201ENST00000531858 PPP2R3BQ9Y5P8 575 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 539.3 ms