RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 MADDQ8WXG6 1647 aa8.35□□□□□ -1.07
CASP4-210ENST00000531546 PTPRGP23470 1445 aa8.35□□□□□ -1.07
CASP4-210ENST00000531546 EPRSP07814 1512 aaKnown RBP8.34□□□□□ -1.07
CASP4-210ENST00000531546 MYOCOSA0A1B0GUC4 107 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 EIF4BP23588 611 aaKnown RBP8.34□□□□□ -1.07
CASP4-210ENST00000531546 PDE6BP35913 854 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 TIGD5Q53EQ6 642 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 ANKS4BQ8N8V4 417 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 CYB5D2Q8WUJ1 264 aa8.34□□□□□ -1.07
CASP4-210ENST00000531546 ZNF552Q9H707 407 aaPredicted RBP8.34□□□□□ -1.07
CASP4-210ENST00000531546 ADAMTSL3P82987 1691 aa8.34□□□□□ -1.08
CASP4-210ENST00000531546 RIMS1Q86UR5 1692 aaKnown RBP8.34□□□□□ -1.08
CASP4-210ENST00000531546 BRD1O95696 1058 aa8.33□□□□□ -1.08
CASP4-210ENST00000531546 ACSF2Q96CM8 615 aaPredicted RBP8.33□□□□□ -1.08
CASP4-210ENST00000531546 KCNC2Q96PR1 638 aa8.33□□□□□ -1.08
CASP4-210ENST00000531546 GPR160Q9UJ42 338 aa8.33□□□□□ -1.08
CASP4-210ENST00000531546 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
CASP4-210ENST00000531546 PCDHA11Q9Y5I1 949 aa8.33□□□□□ -1.08
CASP4-210ENST00000531546 A0A0G2JLL6 359 aaPredicted RBP8.32□□□□□ -1.08
CASP4-210ENST00000531546 LIG3P49916 1009 aa8.32□□□□□ -1.08
CASP4-210ENST00000531546 RPL6Q02878 288 aaKnown RBP8.32□□□□□ -1.08
CASP4-210ENST00000531546 TSNAXIP1Q2TAA8 658 aa8.32□□□□□ -1.08
CASP4-210ENST00000531546 RNF141Q8WVD5 230 aa8.32□□□□□ -1.08
CASP4-210ENST00000531546 KCTD3Q9Y597 815 aa8.32□□□□□ -1.08
CASP4-210ENST00000531546 ERICH3Q5RHP9 1530 aa8.32□□□□□ -1.08
CASP4-210ENST00000531546 WRNQ14191 1432 aaPredicted RBP eCLIP8.31□□□□□ -1.08
CASP4-210ENST00000531546 KIAA0586Q9BVV6 1533 aa8.31□□□□□ -1.08
CASP4-210ENST00000531546 SYN1P17600 705 aa8.31□□□□□ -1.08
CASP4-210ENST00000531546 GNA15P30679 374 aa8.31□□□□□ -1.08
CASP4-210ENST00000531546 NFIXQ14938 502 aa8.31□□□□□ -1.08
CASP4-210ENST00000531546 PPP1R13LQ8WUF5 828 aa8.31□□□□□ -1.08
CASP4-210ENST00000531546 RBAK-RBAKDNI3L0D1 243 aa8.3□□□□□ -1.08
CASP4-210ENST00000531546 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
CASP4-210ENST00000531546 LDHBP07195 334 aaKnown RBP8.3□□□□□ -1.08
CASP4-210ENST00000531546 YARSP54577 528 aaKnown RBP8.3□□□□□ -1.08
CASP4-210ENST00000531546 FAM13CQ8NE31 585 aa8.3□□□□□ -1.08
CASP4-210ENST00000531546 GCM1Q9NP62 436 aa8.3□□□□□ -1.08
CASP4-210ENST00000531546 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
CASP4-210ENST00000531546 BCORL1Q5H9F3 1711 aa8.29□□□□□ -1.08
CASP4-210ENST00000531546 RLBP1P12271 317 aa8.29□□□□□ -1.08
CASP4-210ENST00000531546 MARCH10Q8NA82 808 aaPredicted RBP8.29□□□□□ -1.08
CASP4-210ENST00000531546 RTEL1Q9NZ71 1219 aa8.29□□□□□ -1.08
CASP4-210ENST00000531546 OR14I1A6ND48 311 aa8.28□□□□□ -1.08
CASP4-210ENST00000531546 P4HBP07237 508 aaKnown RBP8.28□□□□□ -1.08
CASP4-210ENST00000531546 HRKO00198 91 aa8.27□□□□□ -1.09
CASP4-210ENST00000531546 MAP3K11Q16584 847 aa8.27□□□□□ -1.09
CASP4-210ENST00000531546 DBX2Q6ZNG2 339 aa8.27□□□□□ -1.09
CASP4-210ENST00000531546 ASPNQ9BXN1 380 aa8.27□□□□□ -1.09
CASP4-210ENST00000531546 ZCCHC11Q5TAX3 1644 aaKnown RBP8.27□□□□□ -1.09
CASP4-210ENST00000531546 CD109Q6YHK3 1445 aa8.27□□□□□ -1.09
CASP4-210ENST00000531546 TNIKQ9UKE5 1360 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
CASP4-210ENST00000531546 TRIM13O60858 407 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 SASH1O94885 1247 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 PLCG1P19174 1290 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 TEKQ02763 1124 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 SIGLEC10Q96LC7 697 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 SGPP1Q9BX95 441 aa8.26□□□□□ -1.09
CASP4-210ENST00000531546 PSPNO60542 156 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
CASP4-210ENST00000531546 TNNI2P48788 182 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 CLEC16AQ2KHT3 1053 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 TMEM201Q5SNT2 666 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 SLFN12Q8IYM2 578 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 CXorf38Q8TB03 319 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 SHISA4Q96DD7 197 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 IRAK3Q9Y616 596 aa8.25□□□□□ -1.09
CASP4-210ENST00000531546 MED1Q15648 1581 aaPredicted RBP8.24□□□□□ -1.09
CASP4-210ENST00000531546 UACAQ9BZF9 1416 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 BPNT1O95861 308 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 PI3P19957 117 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 SSPNQ14714 243 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 ADGRF1Q5T601 910 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 LINC01599Q8WXQ3 324 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
CASP4-210ENST00000531546 AK5Q9Y6K8 562 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 WDR7Q9Y4E6 1490 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
CASP4-210ENST00000531546 PRPF40AO75400 957 aaKnown RBP8.23□□□□□ -1.09
CASP4-210ENST00000531546 KREMEN1Q96MU8 473 aa8.23□□□□□ -1.09
CASP4-210ENST00000531546 ASCC2Q9H1I8 757 aaPredicted RBP8.23□□□□□ -1.09
CASP4-210ENST00000531546 MBD1Q9UIS9 605 aaPredicted RBP8.23□□□□□ -1.09
CASP4-210ENST00000531546 CORINQ9Y5Q5 1042 aa8.23□□□□□ -1.09
CASP4-210ENST00000531546 UPK3BL1B0FP48 263 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 UPK3BL2E5RIL1 263 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 LRRN2O75325 713 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 SRSF3P84103 164 aaKnown RBP8.22□□□□□ -1.09
CASP4-210ENST00000531546 OLFML2BQ68BL8 750 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 CCDC84Q86UT8 332 aaPredicted RBP8.22□□□□□ -1.09
CASP4-210ENST00000531546 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 EBF1Q9UH73 591 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 MAGI3Q5TCQ9 1506 aa8.22□□□□□ -1.09
CASP4-210ENST00000531546 UHRF1BP1LA0JNW5 1464 aa8.21□□□□□ -1.09
CASP4-210ENST00000531546 SHISA3A0PJX4 238 aa8.21□□□□□ -1.1
CASP4-210ENST00000531546 AFF3P51826 1226 aaKnown RBP8.21□□□□□ -1.1
CASP4-210ENST00000531546 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
CASP4-210ENST00000531546 RNF111Q6ZNA4 994 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms