RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 WDR46O15213 610 aaKnown RBP22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 MYCNP04198 464 aaPredicted RBP22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 TMEM132BQ14DG7 1078 aa22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 UBE3CQ15386 1083 aa22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 FBXO28Q9NVF7 368 aa22.17■■□□□ 1.14
SSSCA1-206ENST00000531405 MCM3APO60318 1980 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 C20orf194Q5TEA3 1177 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 CTR9Q6PD62 1173 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 MAML3Q96JK9 1138 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 LBHD1Q9BQE6 289 aaPredicted RBP22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 MTMR10Q9NXD2 777 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 ATP11BQ9Y2G3 1177 aa22.16■■□□□ 1.14
SSSCA1-206ENST00000531405 SEPT4O43236 478 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 RAD21O60216 631 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 ABRAQ8N0Z2 381 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 ARRDC4Q8NCT1 418 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 DDRGK1Q96HY6 314 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 LRRCC1Q9C099 1032 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 SLC5A4Q9NY91 659 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 RCAN3Q9UKA8 241 aa22.15■■□□□ 1.14
SSSCA1-206ENST00000531405 KBTBD13C9JR72 458 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 DLL1O00548 723 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 FCER1AP12319 257 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 SLC39A5Q6ZMH5 540 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 STK11IPQ8N1F8 1099 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 KANSL2Q9H9L4 492 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 ADAMTS5Q9UNA0 930 aa22.14■■□□□ 1.13
SSSCA1-206ENST00000531405 PGK2P07205 417 aa22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 FAM47AQ5JRC9 791 aa22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 FAM83BQ5T0W9 1011 aa22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 MMP19Q99542 508 aa22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 CHMP4BQ9H444 224 aaKnown RBP22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 PRKAG2Q9UGJ0 569 aa22.13■■□□□ 1.13
SSSCA1-206ENST00000531405 SLC25A27O95847 323 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 ADCYAP1R1P41586 468 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 ZSCAN25Q6NSZ9 544 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 FERMT2Q96AC1 680 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 GOPCQ9HD26 462 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 PRDM5Q9NQX1 630 aaPredicted RBP22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 STXBP5LQ9Y2K9 1186 aa22.12■■□□□ 1.13
SSSCA1-206ENST00000531405 VWA5AO00534 786 aa22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 LRRC41Q15345 812 aa22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 TRIM60Q495X7 471 aa22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 RIOX2Q8IUF8 465 aa22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 STRBPQ96SI9 672 aaKnown RBP22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 NUP88Q99567 741 aaPredicted RBP22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 ARPP21Q9UBL0 812 aaPredicted RBP22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 PPP1R9AQ9ULJ8 1098 aa22.11■■□□□ 1.13
SSSCA1-206ENST00000531405 TSHZ3Q63HK5 1081 aa22.1■■□□□ 1.13
SSSCA1-206ENST00000531405 REPS2Q8NFH8 660 aa22.1■■□□□ 1.13
SSSCA1-206ENST00000531405 ZNF214Q9UL59 606 aaPredicted RBP22.1■■□□□ 1.13
SSSCA1-206ENST00000531405 PRUNE2Q8WUY3 3088 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 GSG1L2A8MUP6 293 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 TAL1P17542 331 aaPredicted RBP22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 RASA1P20936 1047 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 STAT3P40763 770 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 SNX17Q15036 470 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 ECHDC1Q9NTX5 307 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 CDH23Q9H251 3354 aa22.09■■□□□ 1.13
SSSCA1-206ENST00000531405 MINDY4BA8MYZ0 360 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 KCTD2Q14681 263 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 ZNF792Q3KQV3 632 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 SH3RF1Q7Z6J0 888 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 OSBP2Q969R2 916 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 LENG1Q96BZ8 264 aaPredicted RBP22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 FAM161BQ96MY7 647 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 TINF2Q9BSI4 451 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 XPNPEP3Q9NQH7 507 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 PDLIM7Q9NR12 457 aa22.08■■□□□ 1.13
SSSCA1-206ENST00000531405 POTEB2H3BUK9 544 aa22.07■■□□□ 1.12
SSSCA1-206ENST00000531405 SBK1Q52WX2 424 aa22.07■■□□□ 1.12
SSSCA1-206ENST00000531405 KBTBD3Q8NAB2 608 aa22.07■■□□□ 1.12
SSSCA1-206ENST00000531405 BADQ92934 168 aa22.07■■□□□ 1.12
SSSCA1-206ENST00000531405 PGK1P00558 417 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 RARBP10826 455 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 SHHQ15465 462 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 C9orf50Q5SZB4 431 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 GUCD1Q96NT3 240 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 SLF1Q9BQI6 1058 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 MKNK2Q9HBH9 465 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 EPB41L4AQ9HCS5 686 aaPredicted RBP22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 ROBO3Q96MS0 1386 aa22.06■■□□□ 1.12
SSSCA1-206ENST00000531405 TRIM43BA6NCK2 446 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 NDUFB10O96000 172 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 APPBP2Q92624 585 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 TRIM43Q96BQ3 446 aaPredicted RBP22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 NRBP1Q9UHY1 535 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 PHF24Q9UPV7 400 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 DIS3Q9Y2L1 958 aaKnown RBP22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 RIPK3Q9Y572 518 aa22.05■■□□□ 1.12
SSSCA1-206ENST00000531405 F5H6K3 240 aa22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 ZNF865P0CJ78 1059 aaPredicted RBP22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 SLC4A3P48751 1232 aa22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 TLE2Q04725 743 aa22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 KLRC3Q07444 240 aa22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 SNRNP48Q6IEG0 339 aaKnown RBP22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 NYAP2Q9P242 653 aa22.04■■□□□ 1.12
SSSCA1-206ENST00000531405 M0R2C6 588 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms