RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 CDK8P49336 464 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 DPP9Q86TI2 863 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 SKAP1Q86WV1 359 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 ATG4CQ96DT6 458 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.4■■□□□ 1.02
PTPN11-204ENST00000531326 VCPKMTQ9H867 229 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 ARHGEF10LQ9HCE6 1279 aa21.4■■□□□ 1.02
PTPN11-204ENST00000531326 COL11A1P12107 1806 aaPredicted RBP21.39■■□□□ 1.02
PTPN11-204ENST00000531326 FLOT1O75955 427 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 UBE3CQ15386 1083 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 OLFML2BQ68BL8 750 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 GPR153Q6NV75 609 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 C16orf86Q6ZW13 317 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 MB21D1Q8N884 522 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 KBTBD3Q8NAB2 608 aa21.39■■□□□ 1.01
PTPN11-204ENST00000531326 LAMA2P24043 3122 aaKnown RBP21.39■■□□□ 1.01
PTPN11-204ENST00000531326 MDM2Q00987 491 aaPredicted RBP21.38■■□□□ 1.01
PTPN11-204ENST00000531326 CCDC17Q96LX7 622 aa21.38■■□□□ 1.01
PTPN11-204ENST00000531326 PUS7LQ9H0K6 701 aaKnown RBP21.38■■□□□ 1.01
PTPN11-204ENST00000531326 ZNFX1Q9P2E3 1918 aaKnown RBP21.37■■□□□ 1.01
PTPN11-204ENST00000531326 DNM1LO00429 736 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 ATN1P54259 1190 aaPredicted RBP21.37■■□□□ 1.01
PTPN11-204ENST00000531326 PLS1Q14651 629 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 CTR9Q6PD62 1173 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 Q7L0L9 218 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 MROH8Q9H579 483 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 SH2D4AQ9H788 454 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 SLC4A4Q9Y6R1 1079 aa21.37■■□□□ 1.01
PTPN11-204ENST00000531326 WDR46O15213 610 aaKnown RBP21.36■■□□□ 1.01
PTPN11-204ENST00000531326 EEF2P13639 858 aaKnown RBP21.36■■□□□ 1.01
PTPN11-204ENST00000531326 TMEM132BQ14DG7 1078 aa21.36■■□□□ 1.01
PTPN11-204ENST00000531326 GJC2Q5T442 439 aaPredicted RBP21.36■■□□□ 1.01
PTPN11-204ENST00000531326 ANO1Q5XXA6 986 aa21.36■■□□□ 1.01
PTPN11-204ENST00000531326 SAMD1Q6SPF0 538 aaPredicted RBP21.36■■□□□ 1.01
PTPN11-204ENST00000531326 NCAPG2Q86XI2 1143 aa21.36■■□□□ 1.01
PTPN11-204ENST00000531326 DEFB123Q8N688 67 aa21.36■■□□□ 1.01
PTPN11-204ENST00000531326 PRAMEF19Q5SWL8 479 aa21.35■■□□□ 1.01
PTPN11-204ENST00000531326 ABRAQ8N0Z2 381 aa21.35■■□□□ 1.01
PTPN11-204ENST00000531326 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
PTPN11-204ENST00000531326 FBXO28Q9NVF7 368 aa21.35■■□□□ 1.01
PTPN11-204ENST00000531326 ADAMTS5Q9UNA0 930 aa21.35■■□□□ 1.01
PTPN11-204ENST00000531326 GREB1LQ9C091 1923 aaPredicted RBP21.35■■□□□ 1.01
PTPN11-204ENST00000531326 SEPT4O43236 478 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 GSPT1P15170 499 aaKnown RBP21.34■■□□□ 1.01
PTPN11-204ENST00000531326 TTC22Q5TAA0 569 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 AMOTL1Q8IY63 956 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 SLC17A8Q8NDX2 589 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 MAML3Q96JK9 1138 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.34■■□□□ 1.01
PTPN11-204ENST00000531326 KANSL2Q9H9L4 492 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 LTBP2Q14767 1821 aa21.34■■□□□ 1.01
PTPN11-204ENST00000531326 A0A0C4DFX4 3053 aa21.33■■□□□ 1.01
PTPN11-204ENST00000531326 RTP1P59025 263 aa21.33■■□□□ 1.01
PTPN11-204ENST00000531326 DDRGK1Q96HY6 314 aa21.33■■□□□ 1.01
PTPN11-204ENST00000531326 FSD1Q9BTV5 496 aa21.33■■□□□ 1.01
PTPN11-204ENST00000531326 TRIM6-TRIM34B2RNG4 842 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 FCER1AP12319 257 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 ARRDC4Q8NCT1 418 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 STRBPQ96SI9 672 aaKnown RBP21.32■■□□□ 1
PTPN11-204ENST00000531326 MTMR10Q9NXD2 777 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 SLC5A4Q9NY91 659 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 SMCHD1A6NHR9 2005 aa21.32■■□□□ 1
PTPN11-204ENST00000531326 PLXNA1Q9UIW2 1896 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
PTPN11-204ENST00000531326 SLC25A27O95847 323 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 SLC39A5Q6ZMH5 540 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 RIOX2Q8IUF8 465 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 REPS2Q8NFH8 660 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
PTPN11-204ENST00000531326 PPP1R9AQ9ULJ8 1098 aa21.31■■□□□ 1
PTPN11-204ENST00000531326 GSG1L2A8MUP6 293 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 KBTBD13C9JR72 458 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 VWA5AO00534 786 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 PGK2P07205 417 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 ZFYP08048 801 aaPredicted RBP21.3■■□□□ 1
PTPN11-204ENST00000531326 FAM47AQ5JRC9 791 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 FAM83BQ5T0W9 1011 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 RILPL2Q969X0 211 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 GOPCQ9HD26 462 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 ZNF214Q9UL59 606 aaPredicted RBP21.3■■□□□ 1
PTPN11-204ENST00000531326 ATP11BQ9Y2G3 1177 aa21.3■■□□□ 1
PTPN11-204ENST00000531326 RASA1P20936 1047 aa21.29■■□□□ 1
PTPN11-204ENST00000531326 LRRC41Q15345 812 aa21.29■■□□□ 1
PTPN11-204ENST00000531326 SBK1Q52WX2 424 aa21.29■■□□□ 1
PTPN11-204ENST00000531326 OSBP2Q969R2 916 aa21.29■■□□□ 1
PTPN11-204ENST00000531326 MMP19Q99542 508 aa21.29■■□□□ 1
PTPN11-204ENST00000531326 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
PTPN11-204ENST00000531326 RAD21O60216 631 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 MYCNP04198 464 aaPredicted RBP21.28■■□□□ 1
PTPN11-204ENST00000531326 SDSP20132 328 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 STAT3P40763 770 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 ADCYAP1R1P41586 468 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 SNX17Q15036 470 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 LRRFIP1Q32MZ4 808 aaKnown RBP21.28■■□□□ 1
PTPN11-204ENST00000531326 ZNF792Q3KQV3 632 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 TICAM2Q86XR7 235 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 STK11IPQ8N1F8 1099 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 APPBP2Q92624 585 aa21.28■■□□□ 1
PTPN11-204ENST00000531326 NUP88Q99567 741 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms