RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 SMCHD1A6NHR9 2005 aa13.67□□□□□ -0.22
FOXRED1-211ENST00000531257 GSG1L2A8MUP6 293 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 COBLO75128 1261 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 FCER1AP12319 257 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 MAGEA10P43363 369 aaPredicted RBP13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 FAM83BQ5T0W9 1011 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 LRCH3Q96II8 777 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 GDF15Q99988 308 aa13.66□□□□□ -0.22
FOXRED1-211ENST00000531257 M0R2C6 588 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 GPAA1O43292 621 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 SLC25A27O95847 323 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 ZFYP08048 801 aaPredicted RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 CYBAP13498 195 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 ATN1P54259 1190 aaPredicted RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 SBK1Q52WX2 424 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 PRAMEF19Q5SWL8 479 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 MMP19Q99542 508 aa13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 NUP88Q99567 741 aaPredicted RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 UBE2OQ9C0C9 1292 aaKnown RBP13.65□□□□□ -0.22
FOXRED1-211ENST00000531257 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 DNM1LO00429 736 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 GNAT2P19087 354 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 RASA1P20936 1047 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 BMP8BP34820 402 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 SLC4A3P48751 1232 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 GIMAP6Q6P9H5 292 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 ZNF444Q8N0Y2 327 aaPredicted RBP13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 ABRAQ8N0Z2 381 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 FSD1Q9BTV5 496 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 PPP1R9AQ9ULJ8 1098 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
FOXRED1-211ENST00000531257 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 VWA5AO00534 786 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 ERC2O15083 957 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 PRDM1O75626 825 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 PGK2P07205 417 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 STAT3P40763 770 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 KCTD2Q14681 263 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 ZNF287Q9HBT7 754 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 CLIP2Q9UDT6 1046 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 ADAMTS5Q9UNA0 930 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 MCM3APO60318 1980 aa13.63□□□□□ -0.23
FOXRED1-211ENST00000531257 LAMA3Q16787 3333 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 PATL2C9JE40 543 aaKnown RBP13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 F5H6K3 240 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 SEPT4O43236 478 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 KLRC3Q07444 240 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 RIOX2Q8IUF8 465 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 IFNL3Q8IZI9 196 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 OTUD7AQ8TE49 926 aaPredicted RBP13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 SLF1Q9BQI6 1058 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 NACAP1Q9BZK3 213 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 NYAP2Q9P242 653 aa13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
FOXRED1-211ENST00000531257 NDUFB10O96000 172 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 IGHA2P01877 340 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 MX1P20591 662 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 SNRNP48Q6IEG0 339 aaKnown RBP13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 CEP95Q96GE4 821 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 NAPBQ9H115 298 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 ZNF214Q9UL59 606 aaPredicted RBP13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 ISY1Q9ULR0 285 aaKnown RBP13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 ATP11BQ9Y2G3 1177 aa13.61□□□□□ -0.23
FOXRED1-211ENST00000531257 TSPY3P0CV98 308 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 TSPY8P0CW00 308 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 COPB2P35606 906 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 RTP1P59025 263 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 PDE4BQ07343 736 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 FAM47AQ5JRC9 791 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 LRRC47Q8N1G4 583 aaKnown RBP13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 FERMT2Q96AC1 680 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 KIFC2Q96AC6 838 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
FOXRED1-211ENST00000531257 TTLL1O95922 423 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 SLC3A2P08195 630 aaKnown RBP13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 RARBP10826 455 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 ZNF792Q3KQV3 632 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 ANKRD45Q5TZF3 282 aa13.59□□□□□ -0.23
FOXRED1-211ENST00000531257 SLC39A5Q6ZMH5 540 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms