RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ENO4A6NNW6 628 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 PEX19P40855 299 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 THEMIS2Q5TEJ8 643 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 SND1Q7KZF4 910 aaKnown RBP eCLIP9.09□□□□□ -0.95
CSDE1-214ENST00000530886 FAM81AQ8TBF8 368 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 CCT6BQ92526 530 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 ZNF570Q96NI8 536 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 RIPOR2Q9Y4F9 1068 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 NR1D1P20393 614 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 TRIM14Q14142 442 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 CTAGE1Q96RT6 745 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 RABEP2Q9H5N1 569 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 NOP53Q9NZM5 478 aaKnown RBP9.09□□□□□ -0.95
CSDE1-214ENST00000530886 MYH2Q9UKX2 1941 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 LRP6O75581 1613 aa9.09□□□□□ -0.95
CSDE1-214ENST00000530886 CFAP73A6NFT4 308 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 B4DLN1 442 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 KIF28PB7ZC32 967 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 MAFGO15525 162 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ZSCAN9O15535 394 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ITGB3BPQ13352 177 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 MORC3Q14149 939 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 PTPAQ15257 358 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NFXL1Q6ZNB6 911 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 BICD1Q96G01 975 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 PLEKHG4BQ96PX9 1271 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 RUFY1Q96T51 708 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 PAPOLBQ9NRJ5 636 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ADD3Q9UEY8 706 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 IQSEC3Q9UPP2 1182 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 MST1RQ04912 1400 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ANP32DO95626 131 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 PRLRP16471 622 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ERVK-24P63145 666 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 PNOCQ13519 176 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 BYSLQ13895 437 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 FNBP4Q8N3X1 1017 aaPredicted RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ARFGAP2Q8N6H7 521 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 RRP36Q96EU6 259 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 MAP3K14Q99558 947 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 KCNMB3Q9NPA1 279 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 SETD1BQ9UPS6 1966 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 GPR75-ASB3A0A0A6YYF3 556 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NPTXRO95502 500 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 GUCY1A3Q02108 690 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■□□□□ 9.8
CSDE1-214ENST00000530886 CCDC57Q2TAC2 916 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 CDKAL1Q5VV42 579 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ARHGAP22Q7Z5H3 698 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 SPATA20Q8TB22 786 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NUDT16Q96DE0 195 aaKnown RBP9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ZIM3Q96PE6 472 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NDST4Q9H3R1 872 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 SLC12A4Q9UP95 1085 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 ASB3Q9Y575 518 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 NEO1Q92859 1461 aa9.08□□□□□ -0.96
CSDE1-214ENST00000530886 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 GYPCP04921 128 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PLCD1P51178 756 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 MYO1EQ12965 1108 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 SPRED3Q2MJR0 410 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 CCDC181Q5TID7 509 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 SHC4Q6S5L8 630 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 GSPT2Q8IYD1 628 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 B4GALNT2Q8NHY0 566 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ATP6V1G3Q96LB4 118 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 EPAS1Q99814 870 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ZFATQ9P243 1243 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ANKIB1Q9P2G1 1089 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PCDHA5Q9Y5H7 936 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 UBR1Q8IWV7 1749 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 A0A0G2JLW4 131 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 RNF8O76064 485 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ATP1A1P05023 1023 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PYGLP06737 847 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 VIMP08670 466 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 ATP4AP20648 1035 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 GGT6Q6P531 493 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 GORASP1Q9BQQ3 440 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 MAN1B1Q9UKM7 699 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 FOXP2O15409 715 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 CNGA1P29973 690 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 PDIA3P30101 505 aaKnown RBP9.07□□□□□ -0.96
CSDE1-214ENST00000530886 SGSM1Q2NKQ1 1148 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 HHATQ5VTY9 493 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 CCDC102BQ68D86 513 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 MSL1Q68DK7 614 aa9.07□□□□□ -0.96
CSDE1-214ENST00000530886 TBC1D5Q92609 795 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms