RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 MAPK1P28482 360 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 ZNF157P51786 506 aaPredicted RBP10.14□□□□□ -0.79
CHKA-205ENST00000530730 TOM1L2Q6ZVM7 507 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 SRCIN1Q9C0H9 1055 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 COL5A2P05997 1499 aaPredicted RBP10.14□□□□□ -0.79
CHKA-205ENST00000530730 CRB1P82279 1406 aa10.14□□□□□ -0.79
CHKA-205ENST00000530730 TTC21BQ7Z4L5 1316 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 LMO7Q8WWI1 1683 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 TXKP42681 527 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 DDB1Q16531 1140 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHKA-205ENST00000530730 ARHGEF25Q86VW2 580 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 ABI1Q8IZP0 508 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 GOLGA2P5Q9HBQ8 144 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 DISC1Q9NRI5 854 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 TIMELESSQ9UNS1 1208 aa10.13□□□□□ -0.79
CHKA-205ENST00000530730 TNS1Q9HBL0 1735 aaKnown RBP10.13□□□□□ -0.79
CHKA-205ENST00000530730 CYP27C1Q4G0S4 372 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 CBLL1Q75N03 491 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 PTF1AQ7RTS3 328 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 SULF2Q8IWU5 870 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 C3orf58Q8NDZ4 430 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 ANKRD24Q8TF21 1146 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 PIDD1Q9HB75 910 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 CACNA2D2Q9NY47 1150 aa10.12□□□□□ -0.79
CHKA-205ENST00000530730 ZC3H7BQ9UGR2 993 aaKnown RBP10.12□□□□□ -0.79
CHKA-205ENST00000530730 WDR17Q8IZU2 1322 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 PLSCR1O15162 318 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 NME2P22392 152 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 ARNTP27540 789 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHKA-205ENST00000530730 NXPE4Q6UWF7 544 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 MARCH10Q8NA82 808 aaPredicted RBP10.11□□□□□ -0.79
CHKA-205ENST00000530730 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 EMILIN2Q9BXX0 1053 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 ZC3H12CQ9C0D7 883 aaKnown RBP10.11□□□□□ -0.79
CHKA-205ENST00000530730 PPM1HQ9ULR3 514 aa10.11□□□□□ -0.79
CHKA-205ENST00000530730 ZNF252P-AS1Q0IIN9 211 aa10.1□□□□□ -0.79
CHKA-205ENST00000530730 KRTAP19-1Q8IUB9 90 aa10.1□□□□□ -0.79
CHKA-205ENST00000530730 ZSCAN29Q8IWY8 852 aaPredicted RBP10.1□□□□□ -0.79
CHKA-205ENST00000530730 SMYD4Q8IYR2 804 aaPredicted RBP10.1□□□□□ -0.79
CHKA-205ENST00000530730 AGBL5Q8NDL9 886 aa10.1□□□□□ -0.79
CHKA-205ENST00000530730 SLIT3O75094 1523 aa10.1□□□□□ -0.79
CHKA-205ENST00000530730 ROCK2O75116 1388 aaKnown RBP10.1□□□□□ -0.79
CHKA-205ENST00000530730 TTC21AQ8NDW8 1320 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 GIPC1O14908 333 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 KCNQ2O43526 872 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 GSTT1P30711 240 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 KCNA1Q09470 495 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 ZC3H12AQ5D1E8 599 aaKnown RBP10.09□□□□□ -0.79
CHKA-205ENST00000530730 NECAB3Q96P71 396 aaPredicted RBP10.09□□□□□ -0.79
CHKA-205ENST00000530730 SPON1Q9HCB6 807 aa10.09□□□□□ -0.79
CHKA-205ENST00000530730 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 OVOS2A0A0J9YW53 1432 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 CPSF1Q10570 1443 aaKnown RBP10.08□□□□□ -0.8
CHKA-205ENST00000530730 OVOS2Q6IE36 1432 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 EXOC5O00471 708 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 ERVK-24P63145 666 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 LCE3BQ5TA77 95 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 SCARA3Q6AZY7 606 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 KRTAP1-3Q8IUG1 177 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 STK35Q8TDR2 534 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 KCNB2Q92953 911 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 ASB16Q96NS5 453 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 LRRC4CQ9HCJ2 640 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 PAK6Q9NQU5 681 aaPredicted RBP10.08□□□□□ -0.8
CHKA-205ENST00000530730 AKAP2Q9Y2D5 859 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 QRICH2Q9H0J4 1663 aa10.08□□□□□ -0.8
CHKA-205ENST00000530730 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
CHKA-205ENST00000530730 TTLL4Q14679 1199 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 ALG1LQ6GMV1 187 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.07□□□□□ -0.8
CHKA-205ENST00000530730 TP53INP2Q8IXH6 220 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 MISP3Q96FF7 219 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 CEP44Q9C0F1 390 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 PCOLCE2Q9UKZ9 415 aa10.07□□□□□ -0.8
CHKA-205ENST00000530730 COL18A1P39060 1754 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 NME9Q86XW9 330 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 PDGFDQ9GZP0 370 aaPredicted RBP10.06□□□□□ -0.8
CHKA-205ENST00000530730 MKNK2Q9HBH9 465 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 PPP1R1BQ9UD71 204 aaPredicted RBP10.06□□□□□ -0.8
CHKA-205ENST00000530730 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 PARP4Q9UKK3 1724 aaKnown RBP10.06□□□□□ -0.8
CHKA-205ENST00000530730 BCL9O00512 1426 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 PIK3C2AO00443 1686 aa10.06□□□□□ -0.8
CHKA-205ENST00000530730 PEAK1Q9H792 1746 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 FLCNQ8NFG4 579 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 BCL7CQ8WUZ0 217 aaPredicted RBP10.05□□□□□ -0.8
CHKA-205ENST00000530730 CARD11Q9BXL7 1154 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 SLC12A5Q9H2X9 1139 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 RREB1Q92766 1687 aa10.05□□□□□ -0.8
CHKA-205ENST00000530730 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
CHKA-205ENST00000530730 USP31Q70CQ4 1352 aa10.04□□□□□ -0.8
CHKA-205ENST00000530730 ENC1O14682 589 aa10.04□□□□□ -0.8
CHKA-205ENST00000530730 NEFMP07197 916 aa10.04□□□□□ -0.8
CHKA-205ENST00000530730 FAM87AP0C7U9 286 aa10.04□□□□□ -0.8
CHKA-205ENST00000530730 CDK5R2Q13319 367 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms