RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 APPP05067 770 aa24.98■■□□□ 1.59
SMPD1-204ENST00000530395 RASA1P20936 1047 aa24.98■■□□□ 1.59
SMPD1-204ENST00000530395 CYP2C19P33261 490 aa24.98■■□□□ 1.59
SMPD1-204ENST00000530395 ABRAQ8N0Z2 381 aa24.98■■□□□ 1.59
SMPD1-204ENST00000530395 ZBTB47Q9UFB7 747 aaPredicted RBP24.98■■□□□ 1.59
SMPD1-204ENST00000530395 DNAH12Q6ZR08 3092 aa24.97■■□□□ 1.59
SMPD1-204ENST00000530395 M0R2C6 588 aa24.97■■□□□ 1.59
SMPD1-204ENST00000530395 COL6A1P12109 1028 aa24.97■■□□□ 1.59
SMPD1-204ENST00000530395 STK11IPQ8N1F8 1099 aa24.97■■□□□ 1.59
SMPD1-204ENST00000530395 STAP2Q9UGK3 403 aa24.97■■□□□ 1.59
SMPD1-204ENST00000530395 ZMYND8Q9ULU4 1186 aaPredicted RBP24.97■■□□□ 1.59
SMPD1-204ENST00000530395 FCER1AP12319 257 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 TMEM132BQ14DG7 1078 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 PI4K2BQ8TCG2 481 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 FSD1Q9BTV5 496 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.96■■□□□ 1.59
SMPD1-204ENST00000530395 NACAP1Q9BZK3 213 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 EPB41L4AQ9HCS5 686 aaPredicted RBP24.96■■□□□ 1.59
SMPD1-204ENST00000530395 PPP1R9AQ9ULJ8 1098 aa24.96■■□□□ 1.59
SMPD1-204ENST00000530395 LAMA3Q16787 3333 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 CYBAP13498 195 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 MX1P20591 662 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 FAM83BQ5T0W9 1011 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 FBXO28Q9NVF7 368 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 NYAP2Q9P242 653 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 ADAMTS5Q9UNA0 930 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 PLXNA1Q9UIW2 1896 aa24.95■■□□□ 1.58
SMPD1-204ENST00000530395 PATL2C9JE40 543 aaKnown RBP24.94■■□□□ 1.58
SMPD1-204ENST00000530395 COBLO75128 1261 aa24.94■■□□□ 1.58
SMPD1-204ENST00000530395 IGHA2P01877 340 aa24.94■■□□□ 1.58
SMPD1-204ENST00000530395 COPB2P35606 906 aa24.94■■□□□ 1.58
SMPD1-204ENST00000530395 ZNF444Q8N0Y2 327 aaPredicted RBP24.94■■□□□ 1.58
SMPD1-204ENST00000530395 VWA5AO00534 786 aa24.93■■□□□ 1.58
SMPD1-204ENST00000530395 RIOX2Q8IUF8 465 aa24.93■■□□□ 1.58
SMPD1-204ENST00000530395 IFNL3Q8IZI9 196 aa24.93■■□□□ 1.58
SMPD1-204ENST00000530395 TRPV1Q8NER1 839 aa24.93■■□□□ 1.58
SMPD1-204ENST00000530395 OTUD7AQ8TE49 926 aaPredicted RBP24.93■■□□□ 1.58
SMPD1-204ENST00000530395 SLC3A2P08195 630 aaKnown RBP24.92■■□□□ 1.58
SMPD1-204ENST00000530395 SYN1P17600 705 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 BMP8BP34820 402 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 STAT3P40763 770 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 MMP19Q99542 508 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 GDF15Q99988 308 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 SLF1Q9BQI6 1058 aa24.92■■□□□ 1.58
SMPD1-204ENST00000530395 F5H6K3 240 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 DNM1LO00429 736 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 PDE4BQ07343 736 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 KLRC3Q07444 240 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 KCTD2Q14681 263 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 MAML3Q96JK9 1138 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 SEC62Q99442 399 aaKnown RBP24.91■■□□□ 1.58
SMPD1-204ENST00000530395 SENP6Q9GZR1 1112 aaPredicted RBP24.91■■□□□ 1.58
SMPD1-204ENST00000530395 NAPBQ9H115 298 aa24.91■■□□□ 1.58
SMPD1-204ENST00000530395 SEPT4O43236 478 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 PRDM1O75626 825 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 NDUFB10O96000 172 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 LRRC26Q2I0M4 334 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 ZMYM1Q5SVZ6 1142 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 ARRDC4Q8NCT1 418 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 CRBNQ96SW2 442 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 NUP88Q99567 741 aaPredicted RBP24.9■■□□□ 1.58
SMPD1-204ENST00000530395 CLIP2Q9UDT6 1046 aa24.9■■□□□ 1.58
SMPD1-204ENST00000530395 ZNF214Q9UL59 606 aaPredicted RBP24.9■■□□□ 1.58
SMPD1-204ENST00000530395 IGKV6D-41A0A0C4DH26 115 aa24.89■■□□□ 1.58
SMPD1-204ENST00000530395 ANKRD45Q5TZF3 282 aa24.89■■□□□ 1.58
SMPD1-204ENST00000530395 REPS2Q8NFH8 660 aa24.89■■□□□ 1.58
SMPD1-204ENST00000530395 SYNPO2Q9UMS6 1093 aa24.89■■□□□ 1.58
SMPD1-204ENST00000530395 TSPY3P0CV98 308 aa24.88■■□□□ 1.57
SMPD1-204ENST00000530395 TSPY8P0CW00 308 aa24.88■■□□□ 1.57
SMPD1-204ENST00000530395 MAGEA10P43363 369 aaPredicted RBP24.88■■□□□ 1.57
SMPD1-204ENST00000530395 PRPF38AQ8NAV1 312 aaKnown RBP24.88■■□□□ 1.57
SMPD1-204ENST00000530395 CEP95Q96GE4 821 aa24.88■■□□□ 1.57
SMPD1-204ENST00000530395 TEX13BQ9BXU2 312 aa24.88■■□□□ 1.57
SMPD1-204ENST00000530395 CTDP1Q9Y5B0 961 aaPredicted RBP24.88■■□□□ 1.57
SMPD1-204ENST00000530395 PLIN4Q96Q06 1357 aa24.88■■□□□ 1.57
SMPD1-204ENST00000530395 KBTBD13C9JR72 458 aa24.87■■□□□ 1.57
SMPD1-204ENST00000530395 TTLL1O95922 423 aa24.87■■□□□ 1.57
SMPD1-204ENST00000530395 MKL1Q969V6 931 aa24.87■■□□□ 1.57
SMPD1-204ENST00000530395 MTMR4Q9NYA4 1195 aa24.87■■□□□ 1.57
SMPD1-204ENST00000530395 NRBP1Q9UHY1 535 aa24.87■■□□□ 1.57
SMPD1-204ENST00000530395 DIS3Q9Y2L1 958 aaKnown RBP24.87■■□□□ 1.57
SMPD1-204ENST00000530395 SALL3Q9BXA9 1300 aa24.86■■□□□ 1.57
SMPD1-204ENST00000530395 PGK2P07205 417 aa24.86■■□□□ 1.57
SMPD1-204ENST00000530395 PPARAQ07869 468 aa24.86■■□□□ 1.57
SMPD1-204ENST00000530395 GJC2Q5T442 439 aaPredicted RBP24.86■■□□□ 1.57
SMPD1-204ENST00000530395 SNRNP48Q6IEG0 339 aaKnown RBP24.86■■□□□ 1.57
SMPD1-204ENST00000530395 ZBED4O75132 1171 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 HDAC1Q13547 482 aaPredicted RBP24.85■■□□□ 1.57
SMPD1-204ENST00000530395 PRAMEF19Q5SWL8 479 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 ANO1Q5XXA6 986 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 LRRC47Q8N1G4 583 aaKnown RBP24.85■■□□□ 1.57
SMPD1-204ENST00000530395 GMCL1P1Q8NEA9 526 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 NEDD1Q8NHV4 660 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 EVI5LQ96CN4 794 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 TINF2Q9BSI4 451 aa24.85■■□□□ 1.57
SMPD1-204ENST00000530395 MYCNP04198 464 aaPredicted RBP24.84■■□□□ 1.57
SMPD1-204ENST00000530395 ATN1P54259 1190 aaPredicted RBP24.84■■□□□ 1.57
SMPD1-204ENST00000530395 ZNF792Q3KQV3 632 aa24.84■■□□□ 1.57
SMPD1-204ENST00000530395 PPP4R3BQ5MIZ7 849 aa24.84■■□□□ 1.57
SMPD1-204ENST00000530395 KIFC2Q96AC6 838 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms