RNA–Protein interactions for RNA: ENST00000530296.5

CTSB-217, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-217ENST00000530296 RRP12Q5JTH9 1297 aaKnown RBP16.61■□□□□ 0.25
CTSB-217ENST00000530296 TREML2Q5T2D2 321 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 RNF20Q5VTR2 975 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 TMX2Q9Y320 296 aa16.61■□□□□ 0.25
CTSB-217ENST00000530296 TTLL1O95922 423 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 EEF2P13639 858 aaKnown RBP16.6■□□□□ 0.25
CTSB-217ENST00000530296 ATP2B2Q01814 1243 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
CTSB-217ENST00000530296 SOCS4Q8WXH5 440 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 ASCC2Q9H1I8 757 aaPredicted RBP16.6■□□□□ 0.25
CTSB-217ENST00000530296 MTMR4Q9NYA4 1195 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 MORF4L1Q9UBU8 362 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 LAMA4Q16363 1823 aa16.6■□□□□ 0.25
CTSB-217ENST00000530296 IGKV6D-41A0A0C4DH26 115 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 XRCC5P13010 732 aaKnown RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 HOXA7P31268 230 aaPredicted RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 IRX3P78415 501 aaPredicted RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 FAM47AQ5JRC9 791 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 IQCA1Q86XH1 822 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 TBC1D10CQ8IV04 446 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 ACER1Q8TDN7 264 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 GDF15Q99988 308 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 LSG1Q9H089 658 aaKnown RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 TCP11L1Q9NUJ3 509 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
CTSB-217ENST00000530296 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
CTSB-217ENST00000530296 ZYXQ15942 572 aaKnown RBP16.58■□□□□ 0.24
CTSB-217ENST00000530296 RALYLQ86SE5 291 aaKnown RBP16.58■□□□□ 0.24
CTSB-217ENST00000530296 MKL1Q969V6 931 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 CEP95Q96GE4 821 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 TTC14Q96N46 770 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 NUDT12Q9BQG2 462 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTSB-217ENST00000530296 VCPKMTQ9H867 229 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 CLIP2Q9UDT6 1046 aa16.58■□□□□ 0.24
CTSB-217ENST00000530296 GREB1LQ9C091 1923 aaPredicted RBP16.57■□□□□ 0.24
CTSB-217ENST00000530296 A0A1W2PRG0 241 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L15C9J2P7 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L13C9JLJ4 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L11C9JVI0 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L18D6R9N7 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L22D6RA61 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L17D6RBQ6 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L19D6RCP7 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L20D6RJB6 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 CYP21A2P08686 494 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 MAPK4P31152 587 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 USP17L24Q0WX57 530 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 SIAH1Q8IUQ4 282 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 C11orf49Q9H6J7 331 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 OGDHLQ9ULD0 1010 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 COL6A3P12111 3177 aa16.57■□□□□ 0.24
CTSB-217ENST00000530296 WDR46O15213 610 aaKnown RBP16.56■□□□□ 0.24
CTSB-217ENST00000530296 ZKSCAN1P17029 563 aaPredicted RBP16.56■□□□□ 0.24
CTSB-217ENST00000530296 VCAM1P19320 739 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 LRIT3Q3SXY7 679 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 CCAR1Q8IX12 1150 aaKnown RBP16.56■□□□□ 0.24
CTSB-217ENST00000530296 GMCL1P1Q8NEA9 526 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 GPRC5AQ8NFJ5 357 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 NCOA7Q8NI08 942 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 INCENPQ9NQS7 918 aa16.56■□□□□ 0.24
CTSB-217ENST00000530296 NEDD4P46934 1319 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 DLL1O00548 723 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 KDM4AO75164 1064 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
CTSB-217ENST00000530296 SART3Q15020 963 aaKnown RBP16.55■□□□□ 0.24
CTSB-217ENST00000530296 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 MAP3K21Q5TCX8 1036 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 DGKHQ86XP1 1220 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 CLEC10AQ8IUN9 316 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 C7orf61Q8IZ16 206 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 UBAC1Q9BSL1 405 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 ALPK3Q96L96 1907 aa16.55■□□□□ 0.24
CTSB-217ENST00000530296 B4E1Z4 1266 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 E7EWF7 191 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 F5H6K3 240 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 RAD21O60216 631 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
CTSB-217ENST00000530296 NOVP48745 357 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 KLRC3Q07444 240 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 KRT32Q14532 448 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 CATSPERGQ6ZRH7 1159 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 TDHQ8IZJ6 230 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 DIS3LQ8TF46 1054 aaKnown RBP16.54■□□□□ 0.24
CTSB-217ENST00000530296 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 RPAP3Q9H6T3 665 aaPredicted RBP16.54■□□□□ 0.24
CTSB-217ENST00000530296 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 HOXC10Q9NYD6 342 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 GTF3C3Q9Y5Q9 886 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 TACC3Q9Y6A5 838 aa16.54■□□□□ 0.24
CTSB-217ENST00000530296 ERICH2A1L162 156 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 SLC27A2O14975 620 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 HERVK_113P62684 666 aa16.53■□□□□ 0.24
CTSB-217ENST00000530296 COG2Q14746 738 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms