RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 ZAP70P43403 619 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 PLS1Q14651 629 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 METTL16Q86W50 562 aaKnown RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 NCAPG2Q86XI2 1143 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 CLEC10AQ8IUN9 316 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 FOXP4Q8IVH2 680 aaPredicted RBP4.32□□□□□ -1.72
PTPRC-213ENST00000529828 C12orf42Q96LP6 360 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 TANGO6Q9C0B7 1094 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 PRDM12Q9H4Q4 367 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 TNNQ9UQP3 1299 aa4.32□□□□□ -1.72
PTPRC-213ENST00000529828 RLFQ13129 1914 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 MPHOSPH10O00566 681 aaKnown RBP4.31□□□□□ -1.72
PTPRC-213ENST00000529828 IDH1O75874 414 aaKnown RBP4.31□□□□□ -1.72
PTPRC-213ENST00000529828 PGK2P07205 417 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 CLTBP09497 229 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 UQCRFS1P1P0C7P4 283 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 RAG1P15918 1043 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 TAL1P17542 331 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-213ENST00000529828 CYP7A1P22680 504 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 USP5P45974 858 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 FPGSQ05932 587 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 SEPT2Q15019 361 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 SNX17Q15036 470 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 ABCB5Q2M3G0 1257 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 ALDH1L2Q3SY69 923 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 KIAA1755Q5JYT7 1200 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 CCDC129Q6ZRS4 1044 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 KHSRPQ92945 711 aaKnown RBP eCLIP4.31□□□□□ -1.725e-7■■□□□ 12.4
PTPRC-213ENST00000529828 TIFAQ96CG3 184 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 NECAB3Q96P71 396 aaPredicted RBP4.31□□□□□ -1.72
PTPRC-213ENST00000529828 SPATC1LQ9H0A9 340 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 KIAA1683Q9H0B3 1180 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 ZNF576Q9H609 170 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 XPNPEP3Q9NQH7 507 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 TLR7Q9NYK1 1049 aaKnown RBP4.31□□□□□ -1.72
PTPRC-213ENST00000529828 LHX6Q9UPM6 363 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 TRANK1O15050 2925 aa4.31□□□□□ -1.72
PTPRC-213ENST00000529828 A0A1W2PRG0 241 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 IGHA2P01877 340 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 IGFBP4P22692 258 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 GUCY1A2P33402 732 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 SHMT1P34896 483 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 PLCD1P51178 756 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 USP14P54578 494 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 PPP4CP60510 307 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 SLFN5Q08AF3 891 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 G3BP1Q13283 466 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 OS9Q13438 667 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 CERKLQ49MI3 558 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 OLFML2BQ68BL8 750 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 TATDN1Q6P1N9 297 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 ATF7IPQ6VMQ6 1270 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 SPICE1Q8N0Z3 855 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 MICALL1Q8N3F8 863 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 ADAMTS19Q8TE59 1207 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 KCTD12Q96CX2 325 aaKnown RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 ATG4CQ96DT6 458 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 UHRF1Q96T88 793 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 API5Q9BZZ5 524 aaKnown RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 GINM1Q9NU53 330 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 TMEM39AQ9NV64 488 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 SERPINB13Q9UIV8 391 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 WDFY4Q6ZS81 3184 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 CDK5RAP2Q96SN8 1893 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 A0A1W2PQ45 241 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 A0A1W2PQY0 241 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 APBB1O00213 710 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 HRO43593 1189 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 NUDT7P0C024 238 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 ACRP10323 421 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 RARBP10826 455 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 PLA2G5P39877 138 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 VASPP50552 380 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 ADGRE1Q14246 886 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 TNNI3KQ59H18 835 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 CCDC158Q5M9N0 1113 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 LBX2Q6XYB7 198 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 MAGEB6Q8N7X4 407 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 SLC44A5Q8NCS7 719 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 MAML3Q96JK9 1138 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 GAS2L1Q99501 681 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 PBX4Q9BYU1 374 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 C1orf115Q9H7X2 142 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 CABP5Q9NP86 173 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 THEGQ9P2T0 379 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 CIZ1Q9ULV3 898 aaPredicted RBP4.3□□□□□ -1.72
PTPRC-213ENST00000529828 PHF24Q9UPV7 400 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 TACC3Q9Y6A5 838 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 FPGT-TNNI3KV9GXZ4 949 aa4.3□□□□□ -1.72
PTPRC-213ENST00000529828 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 MYADML2A6NDP7 307 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 KIAA0355O15063 1070 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 RAD21O60216 631 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 FLOT1O75955 427 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 POLR3DP05423 398 aaPredicted RBP4.29□□□□□ -1.72
PTPRC-213ENST00000529828 GNAI3P08754 354 aa4.29□□□□□ -1.72
PTPRC-213ENST00000529828 CYP2D6P10635 497 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms