RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 HPSEQ9Y251 543 aa17.73■□□□□ 0.43
CCDC90B-213ENST00000529611 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 FER1L6Q2WGJ9 1857 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 TRIM75PA6NK02 468 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 MPHOSPH10O00566 681 aaKnown RBP17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 PTPREP23469 700 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 METTL16Q86W50 562 aaKnown RBP17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 PDLIM2Q96JY6 352 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 SGIP1Q9BQI5 828 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 BARHL2Q9NY43 387 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 FBXO2Q9UK22 296 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 CEP131Q9UPN4 1083 aa17.72■□□□□ 0.43
CCDC90B-213ENST00000529611 STXBP3O00186 592 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 WNT7AO00755 349 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 ZNF202O95125 648 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 TATDN1Q6P1N9 297 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 SASS6Q6UVJ0 657 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 HEATR3Q7Z4Q2 680 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 FOXP4Q8IVH2 680 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 HDAC9Q9UKV0 1011 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 MORC2Q9Y6X9 1032 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 BLIDQ8IZY5 108 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 PPP1R1BQ9UD71 204 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 NOL7Q9UMY1 257 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 PCDHA4Q9UN74 947 aa17.71■□□□□ 0.43
CCDC90B-213ENST00000529611 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 GRIN1Q05586 938 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 DLGAP5Q15398 846 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 SHROOM1Q2M3G4 852 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 ANO6Q4KMQ2 910 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 PIK3AP1Q6ZUJ8 805 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 AGBL3Q8NEM8 1001 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 FAM200AQ8TCP9 573 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 SDF4Q9BRK5 362 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 RIOX1Q9H6W3 641 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 M0R2N6 131 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 NFKBIEO00221 500 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 SYKP43405 635 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 CXCL9Q07325 125 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 PPP4R3BQ5MIZ7 849 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 DAGLBQ8NCG7 672 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 RRP36Q96EU6 259 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 TRIM34Q9BYJ4 488 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 UBA5Q9GZZ9 404 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 TMOD2Q9NZR1 351 aa17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-213ENST00000529611 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
CCDC90B-213ENST00000529611 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
CCDC90B-213ENST00000529611 TTC38Q5R3I4 469 aa17.69■□□□□ 0.42
CCDC90B-213ENST00000529611 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
CCDC90B-213ENST00000529611 ZNF70Q9UC06 446 aaPredicted RBP17.69■□□□□ 0.42
CCDC90B-213ENST00000529611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 TCP10L2B9ZVM9 353 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 ATP2B2Q01814 1243 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 ZNF543Q08ER8 600 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 GALNT17Q6IS24 598 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 ZNF579Q8NAF0 562 aaKnown RBP17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 ERCC4Q92889 916 aaPredicted RBP17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 TIGD1Q96MW7 591 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 PIGSQ96S52 555 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 CSRNP1Q96S65 589 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 VAT1LQ9HCJ6 419 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 CD2APQ9Y5K6 639 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 BMP15O95972 392 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 SPDYE2Q495Y8 402 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 SPECC1Q5M775 1068 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 MTMR14Q8NCE2 650 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 RASGRP4Q8TDF6 673 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 DNAJC25Q9H1X3 360 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 KANSL2Q9H9L4 492 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 NYAP2Q9P242 653 aa17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 SEC63Q9UGP8 760 aaKnown RBP17.68■□□□□ 0.42
CCDC90B-213ENST00000529611 ZNF174Q15697 407 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 MKL1Q969V6 931 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 ZMYND12Q9H0C1 365 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 CBX8Q9HC52 389 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 GPCPD1Q9NPB8 672 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 KIAA1468Q9P260 1216 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 USP25Q9UHP3 1055 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 KCNH3Q9ULD8 1083 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 PCDHA6Q9UN73 950 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 PCDHA8Q9Y5H6 950 aa17.67■□□□□ 0.42
CCDC90B-213ENST00000529611 EEF2P13639 858 aaKnown RBP17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 NAPAP54920 295 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 SEPT2Q15019 361 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 STX1AQ16623 288 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 CIAPIN1Q6FI81 312 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 TMEM179Q6ZVK1 233 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 CCDC12Q8WUD4 166 aaPredicted RBP17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 JDP2Q8WYK2 163 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 GDF11O95390 407 aa17.66■□□□□ 0.42
CCDC90B-213ENST00000529611 PTGER2P43116 358 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms