RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 MCM3APO60318 1980 aa23.08■■□□□ 1.29
SSRP1-204ENST00000529002 FCER1AP12319 257 aa23.07■■□□□ 1.28
SSRP1-204ENST00000529002 IRX5P78411 483 aaPredicted RBP23.07■■□□□ 1.28
SSRP1-204ENST00000529002 TMEM132BQ14DG7 1078 aa23.07■■□□□ 1.28
SSRP1-204ENST00000529002 RNF180Q86T96 592 aa23.07■■□□□ 1.28
SSRP1-204ENST00000529002 ABRAQ8N0Z2 381 aa23.07■■□□□ 1.28
SSRP1-204ENST00000529002 SSH3Q8TE77 659 aa23.07■■□□□ 1.28
SSRP1-204ENST00000529002 FRAT1Q92837 279 aaPredicted RBP23.07■■□□□ 1.28
SSRP1-204ENST00000529002 ZNF865P0CJ78 1059 aaPredicted RBP23.06■■□□□ 1.28
SSRP1-204ENST00000529002 ATP8B2P98198 1209 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 CCDC85BQ15834 202 aaPredicted RBP23.06■■□□□ 1.28
SSRP1-204ENST00000529002 C16orf59Q7L2K0 433 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 MB21D1Q8N884 522 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 DYNLL2Q96FJ2 89 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 MMP19Q99542 508 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 TINF2Q9BSI4 451 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 MCM9Q9NXL9 1143 aa23.06■■□□□ 1.28
SSRP1-204ENST00000529002 SMIM22K7EJ46 135 aa23.05■■□□□ 1.28
SSRP1-204ENST00000529002 ADAMTS4O75173 837 aa23.05■■□□□ 1.28
SSRP1-204ENST00000529002 TMEM57Q8N5G2 664 aa23.05■■□□□ 1.28
SSRP1-204ENST00000529002 PBX4Q9BYU1 374 aa23.05■■□□□ 1.28
SSRP1-204ENST00000529002 FBXO28Q9NVF7 368 aa23.05■■□□□ 1.28
SSRP1-204ENST00000529002 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 MYADML2A6NDP7 307 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 ZNF316A6NFI3 1004 aaPredicted RBP23.04■■□□□ 1.28
SSRP1-204ENST00000529002 IGSF3O75054 1194 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 AKR1B1P15121 316 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 MAP3K12Q12852 859 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 ZNF792Q3KQV3 632 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 SDR42E1Q8WUS8 393 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 STARD7Q9NQZ5 370 aa23.04■■□□□ 1.28
SSRP1-204ENST00000529002 ACLYP53396 1101 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 ADGRE1Q14246 886 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 CCDC129Q6ZRS4 1044 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 ANKRD33Q7Z3H0 272 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 CERS3Q8IU89 383 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 ADAMTS19Q8TE59 1207 aa23.03■■□□□ 1.28
SSRP1-204ENST00000529002 GAS2L1Q99501 681 aaPredicted RBP23.03■■□□□ 1.28
SSRP1-204ENST00000529002 DCDC2CA8MYV0 355 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 TIMP1P01033 207 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 ACRP10323 421 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 TMEM240Q5SV17 173 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 TMEM179Q6ZVK1 233 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 ASB2Q96Q27 587 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 VCPKMTQ9H867 229 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 NRBP1Q9UHY1 535 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 TBX21Q9UL17 535 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 SYNRGQ9UMZ2 1314 aa23.02■■□□□ 1.28
SSRP1-204ENST00000529002 AKR1A1P14550 325 aa23.01■■□□□ 1.27
SSRP1-204ENST00000529002 TOX2Q96NM4 488 aa23.01■■□□□ 1.27
SSRP1-204ENST00000529002 THEGQ9P2T0 379 aa23.01■■□□□ 1.27
SSRP1-204ENST00000529002 TMX2Q9Y320 296 aa23.01■■□□□ 1.27
SSRP1-204ENST00000529002 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 SLC25A27O95847 323 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 CSF2RAP15509 400 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 ICA1Q05084 483 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 KCNA10Q16322 511 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 RIOX2Q8IUF8 465 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 LCORLQ8N3X6 602 aa23■■□□□ 1.27
SSRP1-204ENST00000529002 ATXN2LQ8WWM7 1075 aaKnown RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 NECAB3Q96P71 396 aaPredicted RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 CRNKL1Q9BZJ0 848 aaKnown RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 DCP1AQ9NPI6 582 aaPredicted RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 NOP58Q9Y2X3 529 aaKnown RBP23■■□□□ 1.27
SSRP1-204ENST00000529002 CYP2D7A0A087X1C5 515 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 PDE6AP16499 860 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 IGFBP4P22692 258 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 KCTD2Q14681 263 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 SLFNL1Q499Z3 407 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 CCSAPQ6IQ19 270 aaPredicted RBP22.99■■□□□ 1.27
SSRP1-204ENST00000529002 MFSD5Q6N075 450 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 KLHDC9Q8NEP7 349 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 TSEN34Q9BSV6 310 aaKnown RBP22.99■■□□□ 1.27
SSRP1-204ENST00000529002 PPP1R12CQ9BZL4 782 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 ARHGEF10LQ9HCE6 1279 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 ADAMTS5Q9UNA0 930 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
SSRP1-204ENST00000529002 WDR46O15213 610 aaKnown RBP22.98■■□□□ 1.27
SSRP1-204ENST00000529002 SNAI1O95863 264 aaPredicted RBP22.98■■□□□ 1.27
SSRP1-204ENST00000529002 STAT3P40763 770 aa22.98■■□□□ 1.27
SSRP1-204ENST00000529002 AKNAD1Q5T1N1 836 aa22.98■■□□□ 1.27
SSRP1-204ENST00000529002 RASIP1Q5U651 963 aa22.98■■□□□ 1.27
SSRP1-204ENST00000529002 UHRF1Q96T88 793 aaPredicted RBP22.98■■□□□ 1.27
SSRP1-204ENST00000529002 ADCY6O43306 1168 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 PRKAB2O43741 272 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 PLA2G5P39877 138 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 PPIGQ13427 754 aaKnown RBP eCLIP22.97■■□□□ 1.274e-6■■■■□ 25.5
SSRP1-204ENST00000529002 SLC9C2Q5TAH2 1124 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 AACSQ86V21 672 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 NUP133Q8WUM0 1156 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 CNPY2Q9Y2B0 182 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 DIS3Q9Y2L1 958 aaKnown RBP22.97■■□□□ 1.27
SSRP1-204ENST00000529002 ZNF532Q9HCE3 1301 aa22.97■■□□□ 1.27
SSRP1-204ENST00000529002 VWA5AO00534 786 aa22.96■■□□□ 1.27
SSRP1-204ENST00000529002 MRPS5P82675 430 aaKnown RBP22.96■■□□□ 1.27
SSRP1-204ENST00000529002 REPS2Q8NFH8 660 aa22.96■■□□□ 1.27
SSRP1-204ENST00000529002 NKX2-4Q9H2Z4 354 aa22.96■■□□□ 1.27
SSRP1-204ENST00000529002 ARMT1Q9H993 441 aa22.96■■□□□ 1.27
SSRP1-204ENST00000529002 CXXC1Q9P0U4 656 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms