RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	AMOTL1	Q8IY63	956 aa		13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ABRA	Q8N0Z2	381 aa		13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	MAML3	Q96JK9	1138 aa		13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SH2D4A	Q9H788	454 aa		13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ZBTB40	Q9NUA8	1239 aa		13.7	□□□□□ -0.22
PTP4A2-211	ENST00000528840	LRRC41	Q15345	812 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TRIM60	Q495X7	471 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	BAD	Q92934	168 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	DDRGK1	Q96HY6	314 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	MMP19	Q99542	508 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	HAUS7	Q99871	368 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	KANSL2	Q9H9L4	492 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	FBXO28	Q9NVF7	368 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SLC4A4	Q9Y6R1	1079 aa		13.69	□□□□□ -0.22
PTP4A2-211	ENST00000528840	WDR46	O15213	610 aa	Known RBP	13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SLC25A27	O95847	323 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	PGK2	P07205	417 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	STK11IP	Q8N1F8	1099 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	GUCD1	Q96NT3	240 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	DDX19B	Q9UMR2	479 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ADAMTS5	Q9UNA0	930 aa		13.68	□□□□□ -0.22
PTP4A2-211	ENST00000528840	STAT3	P40763	770 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	KCTD2	Q14681	263 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	UBE3C	Q15386	1083 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	FAM47A	Q5JRC9	791 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	C9orf50	Q5SZB4	431 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	CTR9	Q6PD62	1173 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	C16orf86	Q6ZW13	317 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SH3RF1	Q7Z6J0	888 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	RIOX2	Q8IUF8	465 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	GOPC	Q9HD26	462 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	LAMA3	Q16787	3333 aa		13.67	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TRIM43B	A6NCK2	446 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	VWA5A	O00534	786 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SMARCA5	O60264	1052 aa	Predicted RBP	13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	PGK1	P00558	417 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	RARB	P10826	455 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TAL1	P17542	331 aa	Predicted RBP	13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SLC4A3	P48751	1232 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TLE2	Q04725	743 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ZNF792	Q3KQV3	632 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	FAM83B	Q5T0W9	1011 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ZNF697	Q5TEC3	545 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ZSCAN25	Q6NSZ9	544 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TINF2	Q9BSI4	451 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	PUS7L	Q9H0K6	701 aa	Known RBP	13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	XPNPEP3	Q9NQH7	507 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	COL6A3	P12111	3177 aa		13.66	□□□□□ -0.22
PTP4A2-211	ENST00000528840	NAV1	Q8NEY1	1877 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	FRMPD3	Q5JV73	1810 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	RLF	Q13129	1914 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SNX17	Q15036	470 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	RNF180	Q86T96	592 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	SEMA6B	Q9H3T3	888 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	CHMP4B	Q9H444	224 aa	Known RBP	13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	MKNK2	Q9HBH9	465 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	PDLIM7	Q9NR12	457 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	PPP1R9A	Q9ULJ8	1098 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	DIS3	Q9Y2L1	958 aa	Known RBP	13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	TACC3	Q9Y6A5	838 aa		13.65	□□□□□ -0.22
PTP4A2-211	ENST00000528840	ZBED9	Q6R2W3	1325 aa		13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	MINDY4B	A8MYZ0	360 aa		13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	STRBP	Q96SI9	672 aa	Known RBP	13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	NUP88	Q99567	741 aa	Predicted RBP	13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CDX2	Q99626	313 aa	Predicted RBP	13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	LRRCC1	Q9C099	1032 aa		13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	NRBP1	Q9UHY1	535 aa		13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	PHF24	Q9UPV7	400 aa		13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.64	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SMCHD1	A6NHR9	2005 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840		F5H6K3	240 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ITGB8	P26012	769 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	KLRC3	Q07444	240 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	C1orf53	Q5VUE5	145 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	DIEXF	Q68CQ4	756 aa	Known RBP	13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CPXCR1	Q8N123	301 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	REPS2	Q8NFH8	660 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	DDX11	Q96FC9	970 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CLIP2	Q9UDT6	1046 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZNF214	Q9UL59	606 aa	Predicted RBP	13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CNPY2	Q9Y2B0	182 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RIPK3	Q9Y572	518 aa		13.63	□□□□□ -0.23
PTP4A2-211	ENST00000528840	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	GSG1L2	A8MUP6	293 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	PQBP1	O60828	265 aa	Known RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	CLTB	P09497	229 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	AKR1A1	P14550	325 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	RAG1	P15918	1043 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	COPB2	P35606	906 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	ZNF444	Q8N0Y2	327 aa	Predicted RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	LENG1	Q96BZ8	264 aa	Predicted RBP	13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	SLF1	Q9BQI6	1058 aa		13.62	□□□□□ -0.23
PTP4A2-211	ENST00000528840	TMEM39A	Q9NV64	488 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms