RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 PTPROQ16827 1216 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 DZIP3Q86Y13 1208 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 EHD2Q9NZN4 543 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 CEP131Q9UPN4 1083 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 EIF3JO75822 258 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 SLC5A1P13866 664 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 COPB1P53618 953 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 SLC7A5Q01650 507 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 C2orf54Q08AI8 447 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 FOXP1Q9H334 677 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 CWC15Q9P013 229 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 ARFGEF2Q9Y6D5 1785 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 NWD2Q9ULI1 1742 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 XBP1P17861 261 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 LIFRP42702 1097 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 BRD3Q15059 726 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 TSR1Q2NL82 804 aaKnown RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 TMCO4Q5TGY1 634 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 CNGA4Q8IV77 575 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 ENAHQ8N8S7 591 aaPredicted RBP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.11□□□□□ -0.63
SF3B2-206ENST00000528302 MYH15Q9Y2K3 1946 aa11.11□□□□□ -0.63
SF3B2-206ENST00000528302 XDHP47989 1333 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 B4DLN1 442 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 TULP2O00295 520 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 EXOC5O00471 708 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 NKRFO15226 690 aaKnown RBP eCLIP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 RNF40O75150 1001 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 CSF1RP07333 972 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 PRCPP42785 496 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 PANX2Q96RD6 677 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 AGPAT5Q9NUQ2 364 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 L1RE1Q9UN81 338 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 CYP2D6P10635 497 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 NAP1L1P55209 391 aaKnown RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 PAK1Q13153 545 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 ANKRD20A12PQ8NF67 263 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 LPIN2Q92539 896 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 MTRQ99707 1265 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 EPN1Q9Y6I3 576 aaPredicted RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 RIC1Q4ADV7 1423 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 CCDC196A0A1B0GTZ2 297 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 MYBL2P10244 700 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 STAT6P42226 847 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 KANK3Q6NY19 840 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 GOLGA5Q8TBA6 731 aa11.1□□□□□ -0.63
SF3B2-206ENST00000528302 MYO5AQ9Y4I1 1855 aaKnown RBP11.1□□□□□ -0.63
SF3B2-206ENST00000528302 USP17L12C9JPN9 530 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 USP17L21D6R901 530 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 ERCC5P28715 1186 aaPredicted RBP11.09□□□□□ -0.63
SF3B2-206ENST00000528302 ARHGAP25P42331 645 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 PKN1Q16512 942 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 RASGRP2Q7LDG7 609 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 SRLQ86TD4 932 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 EXOC4Q96A65 974 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 LACRTQ9GZZ8 138 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 CNNM2Q9H8M5 875 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
SF3B2-206ENST00000528302 MYH8P13535 1937 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 MAP3K15Q6ZN16 1313 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 COL18A1P39060 1754 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 MAP2K7O14733 419 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 KCNQ2O43526 872 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 UQCRFS1P1P0C7P4 283 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 ATP6V1AP38606 617 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 CYP26C1Q6V0L0 522 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 ESR2Q92731 530 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 UBXN6Q9BZV1 441 aa11.09□□□□□ -0.63
SF3B2-206ENST00000528302 NDUFA10O95299 355 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 PLEKP08567 350 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 SF3A3Q12874 501 aaKnown RBP eCLIP11.08□□□□□ -0.647e-7■■■□□ 16.4
SF3B2-206ENST00000528302 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 SMARCC1Q92922 1105 aaPredicted RBP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 VAT1LQ9HCJ6 419 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 BRMS1Q9HCU9 246 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 AATFQ9NY61 560 aaKnown RBP eCLIP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 LUC7L2Q9Y383 392 aaKnown RBP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 REXO2Q9Y3B8 237 aaKnown RBP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 UTRNP46939 3433 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 MAGEB6P1A0A0J9YX57 407 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 PARP1P09874 1014 aaKnown RBP11.08□□□□□ -0.64
SF3B2-206ENST00000528302 E2F4Q16254 413 aa11.08□□□□□ -0.64
SF3B2-206ENST00000528302 IL17AQ16552 155 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms