RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 RAD21O60216 631 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 NDUFB10O96000 172 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 IGHA2P01877 340 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 ZNF444Q8N0Y2 327 aaPredicted RBP28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 CEP95Q96GE4 821 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 CLIP2Q9UDT6 1046 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 PPP1R9AQ9ULJ8 1098 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 SUPT16HQ9Y5B9 1047 aaKnown RBP28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 TACC3Q9Y6A5 838 aa28.54■■■□□ 2.16
PACSIN3-204ENST00000528201 A0A0D9SFI3 127 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 F5H6K3 240 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 ADORA2AP29274 412 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 NUCB1Q02818 461 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 KLRC3Q07444 240 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 PLS1Q14651 629 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 FAM47AQ5JRC9 791 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 CHD1LQ86WJ1 897 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 INCENPQ9NQS7 918 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 MTMR4Q9NYA4 1195 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 OGDHLQ9ULD0 1010 aa28.53■■■□□ 2.16
PACSIN3-204ENST00000528201 COBLO75128 1261 aa28.52■■■□□ 2.16
PACSIN3-204ENST00000528201 CAPN2P17655 700 aa28.52■■■□□ 2.16
PACSIN3-204ENST00000528201 REPS2Q8NFH8 660 aa28.52■■■□□ 2.16
PACSIN3-204ENST00000528201 HTATIP2Q9BUP3 242 aa28.52■■■□□ 2.16
PACSIN3-204ENST00000528201 PLIN4Q96Q06 1357 aa28.51■■■□□ 2.16
PACSIN3-204ENST00000528201 VWA5AO00534 786 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 LHX8Q68G74 356 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 NCAPG2Q86XI2 1143 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 PLEKHM2Q8IWE5 1019 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 NEDD1Q8NHV4 660 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 ZNF287Q9HBT7 754 aa28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.51■■■□□ 2.15
PACSIN3-204ENST00000528201 CYP2C19P33261 490 aa28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 CTDSPL2Q05D32 466 aa28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 ZNF589Q86UQ0 364 aaPredicted RBP28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 LRRC47Q8N1G4 583 aaKnown RBP28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 MKL1Q969V6 931 aa28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 HELLSQ9NRZ9 838 aa28.5■■■□□ 2.15
PACSIN3-204ENST00000528201 RANBP2P49792 3224 aaKnown RBP28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 TFAP4Q01664 338 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 PDE4BQ07343 736 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 HABP4Q5JVS0 413 aaKnown RBP28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 MFSD14CQ5VZR4 134 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 ANKLE1Q8NAG6 615 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 TRPV1Q8NER1 839 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 MROH8Q9H579 483 aa28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 ZNF214Q9UL59 606 aaPredicted RBP28.49■■■□□ 2.15
PACSIN3-204ENST00000528201 STRNO43815 780 aa28.48■■■□□ 2.15
PACSIN3-204ENST00000528201 NMIQ13287 307 aaPredicted RBP28.48■■■□□ 2.15
PACSIN3-204ENST00000528201 NECAB2Q7Z6G3 386 aa28.48■■■□□ 2.15
PACSIN3-204ENST00000528201 COLQQ9Y215 455 aaPredicted RBP28.48■■■□□ 2.15
PACSIN3-204ENST00000528201 TTLL1O95922 423 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 TSPY3P0CV98 308 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 TSPY8P0CW00 308 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 DPP9Q86TI2 863 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 RIOX2Q8IUF8 465 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 SLF1Q9BQI6 1058 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 PARP14Q460N5 1801 aa28.47■■■□□ 2.15
PACSIN3-204ENST00000528201 TRIM6-TRIM34B2RNG4 842 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 SLC3A2P08195 630 aaKnown RBP28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 ALX1Q15699 326 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 MCMDC2Q4G0Z9 681 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 ABRAQ8N0Z2 381 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 OSBPL3Q9H4L5 887 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 ANAPC4Q9UJX5 808 aa28.46■■■□□ 2.15
PACSIN3-204ENST00000528201 SLC25A27O95847 323 aa28.45■■■□□ 2.14
PACSIN3-204ENST00000528201 STAT3P40763 770 aa28.45■■■□□ 2.14
PACSIN3-204ENST00000528201 OLFML2BQ68BL8 750 aa28.45■■■□□ 2.14
PACSIN3-204ENST00000528201 RILPL2Q969X0 211 aa28.45■■■□□ 2.14
PACSIN3-204ENST00000528201 ZNF236Q9UL36 1845 aa28.45■■■□□ 2.14
PACSIN3-204ENST00000528201 NMT2O60551 498 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 FGAP02671 866 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 GMCL1P1Q8NEA9 526 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 NBPF3Q9H094 633 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 IL17RBQ9NRM6 502 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 SYNPO2Q9UMS6 1093 aa28.44■■■□□ 2.14
PACSIN3-204ENST00000528201 PFASO15067 1338 aa28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 FCER1AP12319 257 aa28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 CYBAP13498 195 aa28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 IRX6P78412 446 aaPredicted RBP28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 TICAM2Q86XR7 235 aa28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 RIPK3Q9Y572 518 aa28.43■■■□□ 2.14
PACSIN3-204ENST00000528201 PGK2P07205 417 aa28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 HSPD1P10809 573 aaKnown RBP28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 SLFN13Q68D06 897 aa28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 MMP19Q99542 508 aa28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 C11orf49Q9H6J7 331 aa28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 DDX20Q9UHI6 824 aaKnown RBP28.42■■■□□ 2.14
PACSIN3-204ENST00000528201 EVI5O60447 810 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 FGRP09769 529 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 COL6A1P12109 1028 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 SDSP20132 328 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 CHRDL2Q6WN34 429 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 PRPF38AQ8NAV1 312 aaKnown RBP28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 KIFC2Q96AC6 838 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 CHMP4CQ96CF2 233 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 MAML3Q96JK9 1138 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 NR2E3Q9Y5X4 410 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 CCDC171Q6TFL3 1326 aa28.41■■■□□ 2.14
PACSIN3-204ENST00000528201 TSPY2A6NKD2 308 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms