RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
CAPN1-212ENST00000527887 A0A1W2PPC1 479 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 FCER1AP12319 257 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 CCND3P30281 292 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-212ENST00000527887 PLS1Q14651 629 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 TMEM132BQ14DG7 1078 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 PPP4R3BQ5MIZ7 849 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 NCAPG2Q86XI2 1143 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 NPLOC4Q8TAT6 608 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 DIS3LQ8TF46 1054 aaKnown RBP16.92■□□□□ 0.3
CAPN1-212ENST00000527887 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 FLRT1Q9NZU1 646 aa16.92■□□□□ 0.3
CAPN1-212ENST00000527887 IGKV6D-41A0A0C4DH26 115 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 F5H6K3 240 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 VWA5AO00534 786 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 FXR1P51114 621 aaKnown RBP eCLIP16.91■□□□□ 0.3
CAPN1-212ENST00000527887 KLRC3Q07444 240 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 RIOX2Q8IUF8 465 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 OTUD7AQ8TE49 926 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-212ENST00000527887 NAPBQ9H115 298 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 PRO3102Q9H379 93 aa16.91■□□□□ 0.3
CAPN1-212ENST00000527887 DDX20Q9UHI6 824 aaKnown RBP16.91■□□□□ 0.3
CAPN1-212ENST00000527887 RANBP2P49792 3224 aaKnown RBP16.91■□□□□ 0.3
CAPN1-212ENST00000527887 MYH7P12883 1935 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 COL6A1P12109 1028 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 STAT3P40763 770 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 FAM83BQ5T0W9 1011 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 PRPF38AQ8NAV1 312 aaKnown RBP16.9■□□□□ 0.3
CAPN1-212ENST00000527887 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 RBM27Q9P2N5 1060 aaKnown RBP16.9■□□□□ 0.3
CAPN1-212ENST00000527887 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 NRBP1Q9UHY1 535 aa16.9■□□□□ 0.3
CAPN1-212ENST00000527887 DIS3Q9Y2L1 958 aaKnown RBP16.9■□□□□ 0.3
CAPN1-212ENST00000527887 RAD21O60216 631 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 TTLL1O95922 423 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 CYP2C19P33261 490 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 PDE1AP54750 535 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 NEDD1Q8NHV4 660 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
CAPN1-212ENST00000527887 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 RWDD1Q9H446 243 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-212ENST00000527887 FBXO28Q9NVF7 368 aa16.89■□□□□ 0.29
CAPN1-212ENST00000527887 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-212ENST00000527887 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
CAPN1-212ENST00000527887 ATP2A1O14983 1001 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 COBLO75128 1261 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 NDUFB10O96000 172 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 TSPY3P0CV98 308 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 TSPY8P0CW00 308 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 FDX1P10109 184 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 CYBAP13498 195 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 CNGA1P29973 690 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 PPARAQ07869 468 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 KCTD2Q14681 263 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 ERICH6BQ5W0A0 696 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 GMCL1P1Q8NEA9 526 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 REPS2Q8NFH8 660 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 MMP19Q99542 508 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 TEX13BQ9BXU2 312 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 HELLSQ9NRZ9 838 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 FEM1BQ9UK73 627 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
CAPN1-212ENST00000527887 SEPT4O43236 478 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 BMP8BP34820 402 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 ALX1Q15699 326 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-212ENST00000527887 ARRDC4Q8NCT1 418 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 CEP95Q96GE4 821 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 MAML3Q96JK9 1138 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 GTF3C3Q9Y5Q9 886 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 PFASO15067 1338 aa16.87■□□□□ 0.29
CAPN1-212ENST00000527887 ZNF236Q9UL36 1845 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 DNM1LO00429 736 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 ZBED4O75132 1171 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 PRDM1O75626 825 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 NEFLP07196 543 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 OAZ1P54368 228 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 TFAP4Q01664 338 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 C7orf61Q8IZ16 206 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 MSL3Q8N5Y2 521 aaKnown RBP16.86■□□□□ 0.29
CAPN1-212ENST00000527887 ANAPC4Q9UJX5 808 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-212ENST00000527887 A0A0G2JMZ2 1700 aa16.86■□□□□ 0.29
CAPN1-212ENST00000527887 SMC5Q8IY18 1101 aa16.85■□□□□ 0.29
CAPN1-212ENST00000527887 TRPV1Q8NER1 839 aa16.85■□□□□ 0.29
CAPN1-212ENST00000527887 GDF15Q99988 308 aa16.85■□□□□ 0.29
CAPN1-212ENST00000527887 SUPT16HQ9Y5B9 1047 aaKnown RBP16.85■□□□□ 0.29
CAPN1-212ENST00000527887 RLFQ13129 1914 aa16.85■□□□□ 0.29
CAPN1-212ENST00000527887 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
CAPN1-212ENST00000527887 MYH8P13535 1937 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 BMP3P12645 472 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 ZNF792Q3KQV3 632 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 SLFN13Q68D06 897 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.84■□□□□ 0.29
CAPN1-212ENST00000527887 CHURC1Q8WUH1 139 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 GMCL1Q96IK5 515 aa16.84■□□□□ 0.29
CAPN1-212ENST00000527887 NUP88Q99567 741 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-212ENST00000527887 TINF2Q9BSI4 451 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms