RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
USH1C-207ENST00000527720 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
USH1C-207ENST00000527720 BTDP43251 543 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 FCHSD1Q86WN1 690 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 KIF18AQ8NI77 898 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 ANKRD7Q92527 254 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 TRMT1Q9NXH9 659 aaKnown RBP17.45■□□□□ 0.38
USH1C-207ENST00000527720 AFF2P51816 1311 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 MYH8P13535 1937 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
USH1C-207ENST00000527720 E2F4Q16254 413 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 C16orf86Q6ZW13 317 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 CRAMP1Q96RY5 1269 aa17.45■□□□□ 0.38
USH1C-207ENST00000527720 PALM3A6NDB9 673 aaPredicted RBP17.44■□□□□ 0.38
USH1C-207ENST00000527720 M0R2N6 131 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 TBX2Q13207 712 aaPredicted RBP17.44■□□□□ 0.38
USH1C-207ENST00000527720 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 STAG2Q8N3U4 1231 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 TSC1Q92574 1164 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 PPP1R13BQ96KQ4 1090 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 INTS13Q9NVM9 706 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 USP17L3A6NCW0 530 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 USP17L4A6NCW7 530 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 GAKO14976 1311 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 AFMP43652 599 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 SLC4A8Q2Y0W8 1093 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 SPATA1Q5VX52 437 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 USP17L1Q7RTZ2 530 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 MAPKAPK5Q8IW41 473 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
USH1C-207ENST00000527720 SNED1Q8TER0 1413 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 KLRG2A4D1S0 409 aaPredicted RBP17.43■□□□□ 0.38
USH1C-207ENST00000527720 VEGFAP15692 232 aaPredicted RBP17.43■□□□□ 0.38
USH1C-207ENST00000527720 MCM7P33993 719 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 CUL4BQ13620 913 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 SPECC1LQ69YQ0 1117 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 SLC51AQ86UW1 340 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 TEX11Q8IYF3 940 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 C4orf32Q8N8J7 132 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 ZNF592Q92610 1267 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
USH1C-207ENST00000527720 BARHL2Q9NY43 387 aa17.43■□□□□ 0.38
USH1C-207ENST00000527720 TMEM232C9JQI7 657 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 GLIPR1L2Q4G1C9 344 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 NEDD1Q8NHV4 660 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 MED15Q96RN5 788 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 FAM205AQ6ZU69 1335 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 SYNRGQ9UMZ2 1314 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 CCDC194A0A1B0GVG4 234 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 TXLNAP40222 546 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 CDK8P49336 464 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 TBC1D16Q8TBP0 767 aa17.42■□□□□ 0.38
USH1C-207ENST00000527720 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
USH1C-207ENST00000527720 FLT1P17948 1338 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 A0A1B0GTH6 734 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 LAD1O00515 517 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 ARHGAP6O43182 974 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 GTPBP6O43824 516 aaPredicted RBP17.41■□□□□ 0.38
USH1C-207ENST00000527720 NR1I3Q14994 352 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 MFSD14BQ5SR56 506 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
USH1C-207ENST00000527720 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
USH1C-207ENST00000527720 CTAGE1Q96RT6 745 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 EYA3Q99504 573 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 SAP30BPQ9UHR5 308 aaKnown RBP17.41■□□□□ 0.38
USH1C-207ENST00000527720 STX8Q9UNK0 236 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 ANKRD31Q8N7Z5 1873 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 CYTH3O43739 400 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 RHBDL3P58872 404 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 IL17AQ16552 155 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 WWC2Q6AWC2 1192 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 SLC44A5Q8NCS7 719 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 SAMSN1Q9NSI8 373 aaKnown RBP17.41■□□□□ 0.38
USH1C-207ENST00000527720 PCDHA6Q9UN73 950 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 PCDHA8Q9Y5H6 950 aa17.41■□□□□ 0.38
USH1C-207ENST00000527720 STXBP3O00186 592 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 NOVP48745 357 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 RMND1Q9NWS8 449 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 POLLQ9UGP5 575 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 SUGT1Q9Y2Z0 365 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 PPP1R3GB7ZBB8 358 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 ZSCAN12O43309 604 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 STX10O60499 249 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 NCBP1Q09161 790 aaKnown RBP17.4■□□□□ 0.38
USH1C-207ENST00000527720 SEMA3FQ13275 785 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 SLC35G1Q2M3R5 365 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 CDKAL1Q5VV42 579 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 TMEM139Q8IV31 216 aa17.4■□□□□ 0.38
USH1C-207ENST00000527720 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 POLRMTO00411 1230 aaKnown RBP17.39■□□□□ 0.37
USH1C-207ENST00000527720 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
USH1C-207ENST00000527720 PRPHP41219 470 aa17.39■□□□□ 0.37
USH1C-207ENST00000527720 TYW1BQ6NUM6 668 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms