RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 BLIDQ8IZY5 108 aa23.13■■□□□ 1.29
SMIM3-201ENST00000526627 GPKOWQ92917 476 aaPredicted RBP eCLIP23.13■■□□□ 1.29
SMIM3-201ENST00000526627 ROBO3Q96MS0 1386 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 M0R2N6 131 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 PNMA1Q8ND90 353 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 PANX2Q96RD6 677 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 SH3GLB2Q9NR46 395 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 FAM53CQ9NYF3 392 aa23.12■■□□□ 1.29
SMIM3-201ENST00000526627 AKR1B15C9JRZ8 316 aaPredicted RBP23.11■■□□□ 1.29
SMIM3-201ENST00000526627 CALML3P27482 149 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 GRM4Q14833 912 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 WDR24Q96S15 920 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 ZNF446Q9NWS9 450 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 PRDM4Q9UKN5 801 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 CTNND2Q9UQB3 1225 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
SMIM3-201ENST00000526627 DMTNQ08495 405 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 MTF1Q14872 753 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 ARL6IP4Q66PJ3 421 aaKnown RBP23.11■■□□□ 1.29
SMIM3-201ENST00000526627 MAD2L2Q9UI95 211 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 PCDHA4Q9UN74 947 aa23.11■■□□□ 1.29
SMIM3-201ENST00000526627 GOLGA6L9A6NEM1 432 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 GTPBP6O43824 516 aaPredicted RBP23.1■■□□□ 1.29
SMIM3-201ENST00000526627 URI1O94763 535 aaPredicted RBP23.1■■□□□ 1.29
SMIM3-201ENST00000526627 LDHBP07195 334 aaKnown RBP23.1■■□□□ 1.29
SMIM3-201ENST00000526627 USP5P45974 858 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 RBL2Q08999 1139 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 DESI2Q9BSY9 194 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 USP17L3A6NCW0 530 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 USP17L4A6NCW7 530 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 COBLO75128 1261 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 USP17L1Q7RTZ2 530 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 IGSF22Q8N9C0 903 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 WDR66Q8TBY9 1149 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 RASGRP4Q8TDF6 673 aa23.1■■□□□ 1.29
SMIM3-201ENST00000526627 CCNL1Q9UK58 526 aaPredicted RBP23.1■■□□□ 1.29
SMIM3-201ENST00000526627 DIXDC1Q155Q3 683 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
SMIM3-201ENST00000526627 PYM1Q9BRP8 204 aaKnown RBP23.09■■□□□ 1.29
SMIM3-201ENST00000526627 SOWAHDA6NJG2 315 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 CYTH3O43739 400 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 TADA3O75528 432 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 NT5C2P49902 561 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 PPP4CP60510 307 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 NFIXQ14938 502 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 CTAGE1Q96RT6 745 aa23.09■■□□□ 1.29
SMIM3-201ENST00000526627 SRRTQ9BXP5 876 aaKnown RBP23.09■■□□□ 1.29
SMIM3-201ENST00000526627 MRPL44Q9H9J2 332 aaKnown RBP23.09■■□□□ 1.29
SMIM3-201ENST00000526627 LONP1P36776 959 aaKnown RBP23.08■■□□□ 1.29
SMIM3-201ENST00000526627 GRAPQ13588 217 aa23.08■■□□□ 1.29
SMIM3-201ENST00000526627 SLC44A5Q8NCS7 719 aa23.08■■□□□ 1.29
SMIM3-201ENST00000526627 GRAPLQ8TC17 118 aaPredicted RBP23.08■■□□□ 1.29
SMIM3-201ENST00000526627 TCP11L1Q9NUJ3 509 aa23.08■■□□□ 1.29
SMIM3-201ENST00000526627 LEMD3Q9Y2U8 911 aa23.08■■□□□ 1.29
SMIM3-201ENST00000526627 CDC25AP30304 524 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 GNG11P61952 73 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 UTP14CQ5TAP6 766 aaKnown RBP23.08■■□□□ 1.28
SMIM3-201ENST00000526627 RRAGBQ5VZM2 374 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 RAD9BQ6WBX8 426 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 ANKIB1Q9P2G1 1089 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 NHSQ6T4R5 1651 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 TAF1LQ8IZX4 1826 aa23.08■■□□□ 1.28
SMIM3-201ENST00000526627 NAV1Q8NEY1 1877 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 IGSF3O75054 1194 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 ARHGAP29Q52LW3 1261 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 WWC2Q6AWC2 1192 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 C8orf37Q96NL8 207 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 CARD6Q9BX69 1037 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 LIMA1Q9UHB6 759 aaKnown RBP23.07■■□□□ 1.28
SMIM3-201ENST00000526627 RWDD2AQ9UIY3 292 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 LRRC10BA6NIK2 292 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 PIP4K2BP78356 416 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 KRT31Q15323 416 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 GPR101Q96P66 508 aaPredicted RBP23.07■■□□□ 1.28
SMIM3-201ENST00000526627 PCDHA6Q9UN73 950 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 PCDHA8Q9Y5H6 950 aa23.07■■□□□ 1.28
SMIM3-201ENST00000526627 ITIH6Q6UXX5 1313 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 CASQ1P31415 396 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 MAP3K9P80192 1104 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 ZNF658Q5TYW1 1059 aaPredicted RBP23.06■■□□□ 1.28
SMIM3-201ENST00000526627 DAGLBQ8NCG7 672 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 TGFBRAP1Q8WUH2 860 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 TMEM60Q9H2L4 133 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 MKNK2Q9HBH9 465 aa23.06■■□□□ 1.28
SMIM3-201ENST00000526627 MFAP3LO75121 409 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 RPN1P04843 607 aaKnown RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 GYPCP04921 128 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 GNAQP50148 359 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 KARSQ15046 597 aaKnown RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 NAALADL2Q58DX5 795 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 PPFIBP1Q86W92 1011 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 CPLX3Q8WVH0 158 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 NGLY1Q96IV0 654 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 ADGRG1Q9Y653 693 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 PALM3A6NDB9 673 aaPredicted RBP23.05■■□□□ 1.28
SMIM3-201ENST00000526627 STXBP3O00186 592 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 FECHP22830 423 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 CLCN6P51797 869 aa23.05■■□□□ 1.28
SMIM3-201ENST00000526627 FILIP1LQ4L180 1135 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms