RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 SYNPO2Q9UMS6 1093 aa21.94■■□□□ 1.1
TSPAN4-215ENST00000525334 RANBP6O60518 1105 aaKnown RBP21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 CCL5P13501 91 aa21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 MORN1Q5T089 497 aa21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 WDR78Q5VTH9 848 aa21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 NBPF3Q9H094 633 aa21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 SPATC1LQ9H0A9 340 aa21.93■■□□□ 1.1
TSPAN4-215ENST00000525334 CYP2B6P20813 491 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 USP6NLQ92738 828 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 MOV10L1Q9BXT6 1211 aaKnown RBP21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 IL25Q9H293 177 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 IL17RBQ9NRM6 502 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 TOMM22Q9NS69 142 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 PPP1R9AQ9ULJ8 1098 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 LAMA4Q16363 1823 aa21.92■■□□□ 1.1
TSPAN4-215ENST00000525334 MKI67P46013 3256 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 NMT2O60551 498 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 HMGCRP04035 888 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 GJB1P08034 283 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 PLS1Q14651 629 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 RRP12Q5JTH9 1297 aaKnown RBP21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 TBC1D10CQ8IV04 446 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 GMCL1P1Q8NEA9 526 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 RNF208Q9H0X6 261 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 UNC93B1Q9H1C4 597 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 ADAMTS5Q9UNA0 930 aa21.91■■□□□ 1.1
TSPAN4-215ENST00000525334 COL11A1P12107 1806 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 SLC34A2O95436 690 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 XRCC5P13010 732 aaKnown RBP21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 PTPREP23469 700 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 RGS2P41220 211 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 TMEM132BQ14DG7 1078 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 PPP4R3BQ5MIZ7 849 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 CENPQQ7L2Z9 268 aaPredicted RBP21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 STAG1Q8WVM7 1258 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 TRIB2Q92519 343 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 SLF1Q9BQI6 1058 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 DSCC1Q9BVC3 393 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 STX8Q9UNK0 236 aa21.9■■□□□ 1.1
TSPAN4-215ENST00000525334 SLC15A5A6NIM6 579 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 VWA5AO00534 786 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 ERCC3P19447 782 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 GJA8P48165 433 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 MAP2K5Q13163 448 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 AKNAD1Q5T1N1 836 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 SLFN13Q68D06 897 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 SHCBP1Q8NEM2 672 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 NKX2-3Q8TAU0 364 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 APBA2Q99767 749 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 IVNS1ABPQ9Y6Y0 642 aa21.89■■□□□ 1.09
TSPAN4-215ENST00000525334 RAD50Q92878 1312 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 ZNF213O14771 459 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 PCP11498 1178 aaKnown RBP21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 CHMLP26374 656 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 TRIM32Q13049 653 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 GRB14Q14449 540 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 MFSD6Q6ZSS7 791 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 SHISA4Q96DD7 197 aa21.88■■□□□ 1.09
TSPAN4-215ENST00000525334 NEDD4P46934 1319 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 ZKSCAN1P17029 563 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 NOVP48745 357 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 CCL14Q16627 93 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 NCAPG2Q86XI2 1143 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 REPS2Q8NFH8 660 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 RNF41Q9H4P4 317 aaPredicted RBP21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 ZNF236Q9UL36 1845 aa21.87■■□□□ 1.09
TSPAN4-215ENST00000525334 BMP3P12645 472 aa21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 TRMT44Q8IYL2 757 aaKnown RBP21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 GMCL1Q96IK5 515 aa21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 MROH8Q9H579 483 aa21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 FEM1BQ9UK73 627 aa21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 ZNF214Q9UL59 606 aaPredicted RBP21.86■■□□□ 1.09
TSPAN4-215ENST00000525334 SGPL1O95470 568 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 PRPF38BQ5VTL8 546 aaKnown RBP21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 RIOX2Q8IUF8 465 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 PRPF38AQ8NAV1 312 aaKnown RBP21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 U2AF1L4Q8WU68 220 aaKnown RBP21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 RUFY2Q8WXA3 655 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 KIFC2Q96AC6 838 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 CHMP4CQ96CF2 233 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.85■■□□□ 1.092e-6■■■■□ 22.9
TSPAN4-215ENST00000525334 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 TCP11L1Q9NUJ3 509 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 CTNNA3Q9UI47 895 aa21.85■■□□□ 1.09
TSPAN4-215ENST00000525334 STRNO43815 780 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 SLC25A27O95847 323 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 HOXC6P09630 235 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 MCCP23508 829 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 ADORA2AP29274 412 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 STAT3P40763 770 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 SLC1A4P43007 532 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 IMMTQ16891 758 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 MAP3K21Q5TCX8 1036 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 RASGRP2Q7LDG7 609 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 ESR2Q92731 530 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 DEFB118Q96PH6 123 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 FLRT1Q9NZU1 646 aa21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 ISY1Q9ULR0 285 aaKnown RBP21.84■■□□□ 1.09
TSPAN4-215ENST00000525334 RPTORQ8N122 1335 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms