RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 SLC5A4Q9NY91 659 aa11.55□□□□□ -0.56
TRAPPC4-206ENST00000525303 SMIM22K7EJ46 135 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 PRKAB2O43741 272 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 ADCYAP1R1P41586 468 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 ICA1Q05084 483 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SNX17Q15036 470 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SHHQ15465 462 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 TRIM60Q495X7 471 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 ZNF697Q5TEC3 545 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SIAH1Q8IUQ4 282 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 ABRAQ8N0Z2 381 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 BADQ92934 168 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 FERMT2Q96AC1 680 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 KIF1BPQ96EK5 621 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 TMX2Q9Y320 296 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 GBF1Q92538 1859 aa11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 SPTBN5Q9NRC6 3674 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-206ENST00000525303 CYP2D7A0A087X1C5 515 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 MBD4O95243 580 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 FCER1AP12319 257 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 ADD2P35612 726 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 AAMPQ13685 434 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 LRRC41Q15345 812 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 FAM47AQ5JRC9 791 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 C9orf50Q5SZB4 431 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 PDLIM7Q9NR12 457 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 PAG1Q9NWQ8 432 aa11.53□□□□□ -0.56
TRAPPC4-206ENST00000525303 WDR46O15213 610 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 CHGBP05060 677 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 PGK2P07205 417 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 CDK8P49336 464 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 TMEM132BQ14DG7 1078 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 MMP19Q99542 508 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 XPNPEP3Q9NQH7 507 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 ATP8A2Q9NTI2 1148 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.57
TRAPPC4-206ENST00000525303 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 USP17L12C9JPN9 530 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 USP17L21D6R901 530 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 SLC25A27O95847 323 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 RARBP10826 455 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 EEF2P13639 858 aaKnown RBP11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 TLE2Q04725 743 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 C1orf53Q5VUE5 145 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 RIOX2Q8IUF8 465 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 SIRT2Q8IXJ6 389 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 AMOTL1Q8IY63 956 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 TRIM43Q96BQ3 446 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 CCDC17Q96LX7 622 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 CDX2Q99626 313 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 ADAMTS5Q9UNA0 930 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 PHF24Q9UPV7 400 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
TRAPPC4-206ENST00000525303 RAD21O60216 631 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 HMMRO75330 724 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 PGK1P00558 417 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 KCTD2Q14681 263 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 RNF180Q86T96 592 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 DDRGK1Q96HY6 314 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 TINF2Q9BSI4 451 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 KANSL2Q9H9L4 492 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 GOPCQ9HD26 462 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 SLC4A4Q9Y6R1 1079 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
TRAPPC4-206ENST00000525303 VWA5AO00534 786 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 CLTBP09497 229 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 TAL1P17542 331 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 ATP5JP18859 108 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 ITGB8P26012 769 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 STAT3P40763 770 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 SMAD3P84022 425 aaKnown RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 FAM83BQ5T0W9 1011 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 MAFAQ8NHW3 353 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 HAUS7Q99871 368 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 TTYH1Q9H313 450 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 TACC3Q9Y6A5 838 aa11.49□□□□□ -0.57
TRAPPC4-206ENST00000525303 A0A1W2PQ45 241 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 A0A1W2PQY0 241 aa11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
TRAPPC4-206ENST00000525303 ZNF865P0CJ78 1059 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms