RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CACNB2Q08289 660 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-203ENST00000525013 GRB14Q14449 540 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 MAP3K21Q5TCX8 1036 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 VPS53Q5VIR6 699 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 NCAPG2Q86XI2 1143 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 CEP95Q96GE4 821 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 FAM227BQ96M60 508 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 NUP88Q99567 741 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-203ENST00000525013 HTATIP2Q9BUP3 242 aa22.07■■□□□ 1.12
CAPN1-203ENST00000525013 IGKV6D-41A0A0C4DH26 115 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 A0A0D9SFI3 127 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 F5H6K3 240 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 FOXP2O15409 715 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 KLRC3Q07444 240 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 MCMDC2Q4G0Z9 681 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 FAM47AQ5JRC9 791 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 MFSD14CQ5VZR4 134 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 DPP9Q86TI2 863 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 PLEKHM2Q8IWE5 1019 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 SHCBP1Q8NEM2 672 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 MROH8Q9H579 483 aa22.06■■□□□ 1.12
CAPN1-203ENST00000525013 STRNO43815 780 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 NDUFB10O96000 172 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 IRX6P78412 446 aaPredicted RBP22.05■■□□□ 1.12
CAPN1-203ENST00000525013 TFAP4Q01664 338 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 CTDSPL2Q05D32 466 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 NMIQ13287 307 aaPredicted RBP22.05■■□□□ 1.12
CAPN1-203ENST00000525013 TMEM132BQ14DG7 1078 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 NEDD1Q8NHV4 660 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 MTMR4Q9NYA4 1195 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 PPP1R9AQ9ULJ8 1098 aa22.05■■□□□ 1.12
CAPN1-203ENST00000525013 TTLL1O95922 423 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 HOXC6P09630 235 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 ADORA2AP29274 412 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 TICAM2Q86XR7 235 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 LRRC47Q8N1G4 583 aaKnown RBP22.04■■□□□ 1.12
CAPN1-203ENST00000525013 NPLOC4Q8TAT6 608 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 PAWRQ96IZ0 340 aaKnown RBP22.04■■□□□ 1.12
CAPN1-203ENST00000525013 FLRT1Q9NZU1 646 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 ADAMTS5Q9UNA0 930 aa22.04■■□□□ 1.12
CAPN1-203ENST00000525013 H0YGN5 161 aa22.03■■□□□ 1.12
CAPN1-203ENST00000525013 VWA5AO00534 786 aa22.03■■□□□ 1.12
CAPN1-203ENST00000525013 CCND3P30281 292 aaPredicted RBP22.03■■□□□ 1.12
CAPN1-203ENST00000525013 SLF1Q9BQI6 1058 aa22.03■■□□□ 1.12
CAPN1-203ENST00000525013 INCENPQ9NQS7 918 aa22.03■■□□□ 1.12
CAPN1-203ENST00000525013 SLC25A27O95847 323 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 STAT3P40763 770 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 ALX1Q15699 326 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 NECAB2Q7Z6G3 386 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 ANKLE1Q8NAG6 615 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 DIS3LQ8TF46 1054 aaKnown RBP22.02■■□□□ 1.12
CAPN1-203ENST00000525013 MKL1Q969V6 931 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 OSBPL3Q9H4L5 887 aa22.02■■□□□ 1.12
CAPN1-203ENST00000525013 ISY1Q9ULR0 285 aaKnown RBP22.02■■□□□ 1.12
CAPN1-203ENST00000525013 PLIN4Q96Q06 1357 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 TSPY2A6NKD2 308 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 RANBP6O60518 1105 aaKnown RBP22.01■■□□□ 1.11
CAPN1-203ENST00000525013 FCER1AP12319 257 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 CYP2C19P33261 490 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 SLC5A4Q9NY91 659 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 OGDHLQ9ULD0 1010 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.01■■□□□ 1.11
CAPN1-203ENST00000525013 ZNF236Q9UL36 1845 aa22.01■■□□□ 1.11
CAPN1-203ENST00000525013 COBLO75128 1261 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 FGAP02671 866 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 SDSP20132 328 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 CNGA1P29973 690 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 SLFN13Q68D06 897 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 ZNF589Q86UQ0 364 aaPredicted RBP22■■□□□ 1.11
CAPN1-203ENST00000525013 RIOX2Q8IUF8 465 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 PRPF38AQ8NAV1 312 aaKnown RBP22■■□□□ 1.11
CAPN1-203ENST00000525013 TOMM22Q9NS69 142 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 ANAPC4Q9UJX5 808 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 CTDP1Q9Y5B0 961 aaPredicted RBP22■■□□□ 1.11
CAPN1-203ENST00000525013 CCDC171Q6TFL3 1326 aa22■■□□□ 1.11
CAPN1-203ENST00000525013 HSPD1P10809 573 aaKnown RBP21.99■■□□□ 1.11
CAPN1-203ENST00000525013 SLC4A3P48751 1232 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 PPP4R3BQ5MIZ7 849 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 ABRAQ8N0Z2 381 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 GMCL1P1Q8NEA9 526 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 KIFC2Q96AC6 838 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 CHMP4CQ96CF2 233 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 MMP19Q99542 508 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 NBPF3Q9H094 633 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 ZNF214Q9UL59 606 aaPredicted RBP21.99■■□□□ 1.11
CAPN1-203ENST00000525013 SYNPO2Q9UMS6 1093 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 STX8Q9UNK0 236 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 NR2E3Q9Y5X4 410 aa21.99■■□□□ 1.11
CAPN1-203ENST00000525013 ZBED4O75132 1171 aa21.98■■□□□ 1.11
CAPN1-203ENST00000525013 MFAP1P55081 439 aaKnown RBP21.98■■□□□ 1.11
CAPN1-203ENST00000525013 RRP12Q5JTH9 1297 aaKnown RBP21.98■■□□□ 1.11
CAPN1-203ENST00000525013 REPS2Q8NFH8 660 aa21.98■■□□□ 1.11
CAPN1-203ENST00000525013 DIAPH3Q9NSV4 1193 aa21.98■■□□□ 1.11
CAPN1-203ENST00000525013 PLXNA1Q9UIW2 1896 aa21.98■■□□□ 1.11
CAPN1-203ENST00000525013 TRIOBPQ9H2D6 2365 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 EVI5O60447 810 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 NMT2O60551 498 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 BMP3P12645 472 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 COPB2P35606 906 aa21.97■■□□□ 1.11
CAPN1-203ENST00000525013 HAND2P61296 217 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms