RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CNGA1P29973 690 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 CCND3P30281 292 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 PDE4BQ07343 736 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 AAMPQ13685 434 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 KCTD2Q14681 263 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 ZNF444Q8N0Y2 327 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 NAPBQ9H115 298 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 DDX20Q9UHI6 824 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 SYNPO2Q9UMS6 1093 aa10.57□□□□□ -0.72
CTNNA1-240ENST00000523912 PATL2C9JE40 543 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 M0R2C6 588 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 RASA1P20936 1047 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 MAGEA10P43363 369 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 KIAA1755Q5JYT7 1200 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 FAM83BQ5T0W9 1011 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 FAM109BQ6ICB4 259 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 SIAH1Q8IUQ4 282 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 SLF1Q9BQI6 1058 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 EPB41L4AQ9HCS5 686 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 MTMR10Q9NXD2 777 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 NYAP2Q9P242 653 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 PPP1R9AQ9ULJ8 1098 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 ZMYND8Q9ULU4 1186 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 PLXNB2O15031 1838 aa10.56□□□□□ -0.72
CTNNA1-240ENST00000523912 MYH7P12883 1935 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 VWA5AO00534 786 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 TTLL1O95922 423 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 TSPY3P0CV98 308 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 TSPY8P0CW00 308 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 CYP2C19P33261 490 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 STAT3P40763 770 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 ANKRD45Q5TZF3 282 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 RIOX2Q8IUF8 465 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 IFNL3Q8IZI9 196 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 EVI5LQ96CN4 794 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 MMP19Q99542 508 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 TEX13BQ9BXU2 312 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 UBE2OQ9C0C9 1292 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 FLRT1Q9NZU1 646 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 ISY1Q9ULR0 285 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 PFASO15067 1338 aa10.55□□□□□ -0.72
CTNNA1-240ENST00000523912 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 DNM1LO00429 736 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 ZBED4O75132 1171 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 PRDM1O75626 825 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 NDUFB10O96000 172 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 CYBAP13498 195 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 ZMYM1Q5SVZ6 1142 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 LHX8Q68G74 356 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 ARRDC4Q8NCT1 418 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 OTUD7AQ8TE49 926 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 NRBP1Q9UHY1 535 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 BAZ2AQ9UIF9 1905 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
CTNNA1-240ENST00000523912 PLIN4Q96Q06 1357 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 MYH8P13535 1937 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 KBTBD13C9JR72 458 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 F5H6K3 240 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 SEPT4O43236 478 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 KLRC3Q07444 240 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 PPARAQ07869 468 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 GMCL1P1Q8NEA9 526 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 CEP95Q96GE4 821 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 MAML3Q96JK9 1138 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 FBXO28Q9NVF7 368 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 MTMR4Q9NYA4 1195 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 CLIP2Q9UDT6 1046 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 PRKAG2Q9UGJ0 569 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 FEM1BQ9UK73 627 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 ADAMTS5Q9UNA0 930 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 CNPY2Q9Y2B0 182 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
CTNNA1-240ENST00000523912 IGKV6D-41A0A0C4DH26 115 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 COBLO75128 1261 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 SYN1P17600 705 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 IKQ13123 557 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 SNRNP48Q6IEG0 339 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 NEDD1Q8NHV4 660 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 MKL1Q969V6 931 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 KIFC2Q96AC6 838 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 RWDD1Q9H446 243 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 HELLSQ9NRZ9 838 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 FBXO40Q9UH90 709 aa10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 ZNF214Q9UL59 606 aaPredicted RBP10.52□□□□□ -0.73
CTNNA1-240ENST00000523912 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms