RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-222ENST00000523530 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
DENND3-222ENST00000523530 PFKFB3Q16875 520 aaPredicted RBP18.58■□□□□ 0.56
DENND3-222ENST00000523530 SH2D4AQ9H788 454 aa18.58■□□□□ 0.56
DENND3-222ENST00000523530 GINM1Q9NU53 330 aa18.58■□□□□ 0.56
DENND3-222ENST00000523530 SRCAPQ6ZRS2 3230 aa18.58■□□□□ 0.56
DENND3-222ENST00000523530 F5H6K3 240 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 CYTH3O43739 400 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 KRT85P78386 507 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 KLRC3Q07444 240 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 USP48Q86UV5 1035 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 RRP36Q96EU6 259 aaKnown RBP18.57■□□□□ 0.56
DENND3-222ENST00000523530 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 CPVLQ9H3G5 476 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 VPS54Q9P1Q0 977 aa18.57■□□□□ 0.56
DENND3-222ENST00000523530 A0A1W2PRG0 241 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 DCAF8L1A6NGE4 600 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 MMP1P03956 469 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 KIF23Q02241 960 aaPredicted RBP18.56■□□□□ 0.56
DENND3-222ENST00000523530 EAPPQ56P03 285 aaPredicted RBP18.56■□□□□ 0.56
DENND3-222ENST00000523530 FAM173BQ6P4H8 233 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 KCTD1Q719H9 257 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 ZC3H15Q8WU90 426 aaKnown RBP18.56■□□□□ 0.56
DENND3-222ENST00000523530 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 GOPCQ9HD26 462 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.56■□□□□ 0.56
DENND3-222ENST00000523530 SEC63Q9UGP8 760 aaKnown RBP18.56■□□□□ 0.56
DENND3-222ENST00000523530 KCNJ14Q9UNX9 436 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 CNPY2Q9Y2B0 182 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 TMX2Q9Y320 296 aa18.56■□□□□ 0.56
DENND3-222ENST00000523530 ADM5C9JUS6 153 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 ECE1P42892 770 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 KRT26Q7Z3Y9 468 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 BRAPQ7Z569 592 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 ACER1Q8TDN7 264 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 GMCL1Q96IK5 515 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 WRNIP1Q96S55 665 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 TAF1DQ9H5J8 278 aaPredicted RBP18.55■□□□□ 0.56
DENND3-222ENST00000523530 SSC5DA1L4H1 1573 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
DENND3-222ENST00000523530 NDUFB10O96000 172 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 INPP5BP32019 993 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 CSPP1Q1MSJ5 1256 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 SLC35G1Q2M3R5 365 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 PNMA8AQ86V59 439 aaPredicted RBP18.55■□□□□ 0.56
DENND3-222ENST00000523530 HOMER1Q86YM7 354 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 RIOX1Q9H6W3 641 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 ZNF112Q9UJU3 913 aa18.55■□□□□ 0.56
DENND3-222ENST00000523530 FIBPO43427 364 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 PRPF40AO75400 957 aaKnown RBP18.54■□□□□ 0.56
DENND3-222ENST00000523530 TTBK2Q6IQ55 1244 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 DIS3L2Q8IYB7 885 aaKnown RBP18.54■□□□□ 0.56
DENND3-222ENST00000523530 SCYL3Q8IZE3 742 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 ZNF396Q96N95 335 aaPredicted RBP18.54■□□□□ 0.56
DENND3-222ENST00000523530 FEZ1Q99689 392 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 PHF20Q9BVI0 1012 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 GDPD2Q9HCC8 539 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 BRMS1Q9HCU9 246 aa18.54■□□□□ 0.56
DENND3-222ENST00000523530 KIF28PB7ZC32 967 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 BMP3P12645 472 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 NLRP5P59047 1200 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 IKQ13123 557 aaPredicted RBP18.53■□□□□ 0.56
DENND3-222ENST00000523530 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
DENND3-222ENST00000523530 HEATR3Q7Z4Q2 680 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 CCDC84Q86UT8 332 aaPredicted RBP18.53■□□□□ 0.56
DENND3-222ENST00000523530 GPKOWQ92917 476 aaPredicted RBP eCLIP18.53■□□□□ 0.56
DENND3-222ENST00000523530 PIGSQ96S52 555 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 SH3GLB2Q9NR46 395 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 PICK1Q9NRD5 415 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 CFAP45Q9UL16 551 aa18.53■□□□□ 0.56
DENND3-222ENST00000523530 NF2P35240 595 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 KRT2P35908 639 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 SLC16A2P36021 539 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 PRKG1Q13976 671 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 ADGRF4Q8IZF3 695 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 SPICE1Q8N0Z3 855 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 CCDC148Q8NFR7 591 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 NUP88Q99567 741 aaPredicted RBP18.52■□□□□ 0.56
DENND3-222ENST00000523530 FOXP1Q9H334 677 aaPredicted RBP18.52■□□□□ 0.56
DENND3-222ENST00000523530 VCPKMTQ9H867 229 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 TFIP11Q9UBB9 837 aaKnown RBP18.52■□□□□ 0.56
DENND3-222ENST00000523530 FZD1Q9UP38 647 aa18.52■□□□□ 0.56
DENND3-222ENST00000523530 POTECB2RU33 542 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 BTBD18B2RXH4 712 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.55
DENND3-222ENST00000523530 WWC2Q6AWC2 1192 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 ATL3Q6DD88 541 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 ZKSCAN4Q969J2 545 aaPredicted RBP18.51■□□□□ 0.55
DENND3-222ENST00000523530 SHISA4Q96DD7 197 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 KLRG1Q96E93 195 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 SCAND2PQ9GZW5 306 aaPredicted RBP18.51■□□□□ 0.55
DENND3-222ENST00000523530 AS3MTQ9HBK9 375 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 LMBRD1Q9NUN5 540 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 BARHL2Q9NY43 387 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 CLEC11AQ9Y240 323 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 OTOFQ9HC10 1997 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
DENND3-222ENST00000523530 VEGFAP15692 232 aaPredicted RBP18.51■□□□□ 0.55
DENND3-222ENST00000523530 CALML3P27482 149 aa18.51■□□□□ 0.55
DENND3-222ENST00000523530 MYSM1Q5VVJ2 828 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms