RNA–Protein interactions for RNA: ENST00000523514.1

FAM49B-227, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-227ENST00000523514 CWC27Q6UX04 472 aaKnown RBP9.2□□□□□ -0.94
FAM49B-227ENST00000523514 CCDC84Q86UT8 332 aaPredicted RBP9.2□□□□□ -0.94
FAM49B-227ENST00000523514 SLC44A5Q8NCS7 719 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 ZNF296Q8WUU4 475 aaPredicted RBP9.2□□□□□ -0.94
FAM49B-227ENST00000523514 ERO1AQ96HE7 468 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
FAM49B-227ENST00000523514 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 KRTAP3-2Q9BYR7 98 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 KIAA1683Q9H0B3 1180 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 ARHGEF10LQ9HCE6 1279 aa9.2□□□□□ -0.94
FAM49B-227ENST00000523514 FOXP2O15409 715 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 HSPD1P10809 573 aaKnown RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 PCP11498 1178 aaKnown RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 AKR1B1P15121 316 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 NT5C2P49902 561 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 PRSS12P56730 875 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 SP3Q02447 781 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 ICA1Q05084 483 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 KIF22Q14807 665 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 SEPT2Q15019 361 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 COL13A1Q5TAT6 717 aaPredicted RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 VPS53Q5VIR6 699 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 CTU1Q7Z7A3 348 aaKnown RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 ZNF589Q86UQ0 364 aaPredicted RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 ZNF444Q8N0Y2 327 aaPredicted RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
FAM49B-227ENST00000523514 C12orf42Q96LP6 360 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 KANSL2Q9H9L4 492 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 PPP4R2Q9NY27 417 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 ANAPC4Q9UJX5 808 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 ADGRG1Q9Y653 693 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 PLIN4Q96Q06 1357 aa9.19□□□□□ -0.94
FAM49B-227ENST00000523514 FGAP02671 866 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 RASA1P20936 1047 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 HOXA7P31268 230 aaPredicted RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 GUCY1A2P33402 732 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 IRX3P78415 501 aaPredicted RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 PKN2Q16513 984 aaKnown RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 SHROOM1Q2M3G4 852 aaPredicted RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 BMP2KLQ5H9B9 411 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 TREML2Q5T2D2 321 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
FAM49B-227ENST00000523514 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 LPAR1Q92633 364 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 ADGRA2Q96PE1 1338 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 DSCC1Q9BVC3 393 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 R3HDMLQ9H3Y0 253 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 CTNNA3Q9UI47 895 aa9.18□□□□□ -0.94
FAM49B-227ENST00000523514 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 PPP1R3GB7ZBB8 358 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 SMIM22K7EJ46 135 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 ORC4O43929 436 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 GNRH1P01148 92 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 TSPY3P0CV98 308 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 TSPY8P0CW00 308 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 CYP2C8P10632 490 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 CHMLP26374 656 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 C17orf99Q6UX52 265 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 ACER1Q8TDN7 264 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 FAM117AQ9C073 453 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 RNF41Q9H4P4 317 aaPredicted RBP9.17□□□□□ -0.94
FAM49B-227ENST00000523514 GOPCQ9HD26 462 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 SYNPO2Q9UMS6 1093 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.17□□□□□ -0.94
FAM49B-227ENST00000523514 TMX2Q9Y320 296 aa9.17□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 ZNF213O14771 459 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 WDR46O15213 610 aaKnown RBP9.16□□□□□ -0.94
FAM49B-227ENST00000523514 PRDM1O75626 825 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 FGRP09769 529 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 BCRP11274 1271 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 VCAM1P19320 739 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 PTPREP23469 700 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 DGKZQ13574 1117 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 ZYXQ15942 572 aaKnown RBP9.16□□□□□ -0.94
FAM49B-227ENST00000523514 IMMTQ16891 758 aaKnown RBP9.16□□□□□ -0.94
FAM49B-227ENST00000523514 FAM110CQ1W6H9 321 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 STK11IPQ8N1F8 1099 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 NEDD1Q8NHV4 660 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 PXYLP1Q8TE99 480 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 ASCC2Q9H1I8 757 aaPredicted RBP9.16□□□□□ -0.94
FAM49B-227ENST00000523514 VCPKMTQ9H867 229 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 NYAP2Q9P242 653 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 CPA4Q9UI42 421 aa9.16□□□□□ -0.94
FAM49B-227ENST00000523514 MGAMO43451 1857 aa9.15□□□□□ -0.94
FAM49B-227ENST00000523514 IGKV6D-41A0A0C4DH26 115 aa9.15□□□□□ -0.94
FAM49B-227ENST00000523514 A0A1W2PRG0 241 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms