RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CHRNA2Q15822 529 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 CPLX4Q7Z7G2 160 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 OXER1Q8TDS5 423 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 CCDC43Q96MW1 224 aaKnown RBP10.08□□□□□ -0.8
CSMD1-212ENST00000523387 SENP2Q9HC62 589 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 POLD4Q9HCU8 107 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 B4DLN1 442 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-212ENST00000523387 ZPR1O75312 459 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 GUCY1A2P33402 732 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 EPHB4P54760 987 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 TCP11X2Q5H9J9 407 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 ATG9AQ7Z3C6 839 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 C2CD5Q86YS7 1000 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 NUP58Q9BVL2 599 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 HSD3B7Q9H2F3 369 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 TFR2Q9UP52 801 aa10.08□□□□□ -0.8
CSMD1-212ENST00000523387 TTC26A0AVF1 554 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 TMCO5BA8MYB1 307 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 RPN1P04843 607 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ERCC3P19447 782 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 DNM2P50570 870 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 CLNS1AP54105 237 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ARID5AQ03989 594 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 NNTQ13423 1086 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 WDR93Q6P2C0 686 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 IFNL3Q8IZI9 196 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 RTL9Q8NET4 1388 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ZNF185O15231 689 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ERVK-24P63145 666 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 SCARF1Q14162 830 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ZNF579Q8NAF0 562 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 MAP3K14Q99558 947 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 CCDC113Q9H0I3 377 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 FAM207AQ9NSI2 230 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 BICDL2A1A5D9 508 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 CYP7A1P22680 504 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 HNRNPH1P31943 449 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ATP2B2Q01814 1243 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 SF3A3Q12874 501 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 PDIA6Q15084 440 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 DTHD1Q6ZMT9 781 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 TOM1L2Q6ZVM7 507 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 KRT28Q7Z3Y7 464 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 SPATS2Q86XZ4 545 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 UBXN6Q9BZV1 441 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 AATFQ9NY61 560 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 RWDD2AQ9UIY3 292 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 GDAQ9Y2T3 454 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ITSN1Q15811 1721 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 SIGLEC1Q9BZZ2 1709 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 A0A1B0GUA9 196 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 EXOC5O00471 708 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ADD2P35612 726 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 ZHX3Q9H4I2 956 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 GOPCQ9HD26 462 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 LRWD1Q9UFC0 647 aa10.07□□□□□ -0.8
CSMD1-212ENST00000523387 PTPRUQ92729 1446 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CLGNO14967 610 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CIAO1O76071 339 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CCNI2Q6ZMN8 369 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 KLHL7Q8IXQ5 586 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 NEDD4P46934 1319 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 RIMS1Q86UR5 1692 aaKnown RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 PREX1Q8TCU6 1659 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CPDO75976 1380 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 H7C1W4 665 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 EIF3HO15372 352 aaKnown RBP eCLIP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 ITGA6P23229 1130 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 LIFRP42702 1097 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 PDE4DQ08499 809 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 NEDD9Q14511 834 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CCDC40Q4G0X9 1142 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 NOX5Q96PH1 765 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CEP89Q96ST8 783 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 TUBGCP2Q9BSJ2 902 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 LY9Q9HBG7 655 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 MYO5BQ9ULV0 1848 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 TARSL2A2RTX5 802 aaKnown RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 ACTN4O43707 911 aaKnown RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 RPS6KA5O75582 802 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 PHKG2P15735 406 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 FNBP4Q8N3X1 1017 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 CRACR2BQ8N4Y2 399 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 UBLCP1Q8WVY7 318 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 NHEJ1Q9H9Q4 299 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-212ENST00000523387 ODF2LQ9ULJ1 636 aa10.06□□□□□ -0.8
CSMD1-212ENST00000523387 TRIM49BA6NDI0 452 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 BUB1O43683 1085 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 CD44P16070 742 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms