RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PRR33A8MZF0 331 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 APBB1O00213 710 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 AKR1A1P14550 325 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 RABGGTBP53611 331 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 TINF2Q9BSI4 451 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
NKX3-1-202ENST00000523261 ELP1O95163 1332 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 FGBP02675 491 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 MYOGP15173 224 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 ARID4AP29374 1257 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 KCNA10Q16322 511 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 NAA16Q6N069 864 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 NCAPG2Q86XI2 1143 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 MB21D1Q8N884 522 aa17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.06■□□□□ 0.32
NKX3-1-202ENST00000523261 FCER1AP12319 257 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 CYP2C18P33260 490 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 MCAMP43121 646 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 NHLH1Q02575 133 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 TFCP2Q12800 502 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 PLS1Q14651 629 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 ABCB5Q2M3G0 1257 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 PCDHA11Q9Y5I1 949 aa17.05■□□□□ 0.32
NKX3-1-202ENST00000523261 BRWD1Q9NSI6 2320 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 MYH1P12882 1939 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 MYADML2A6NDP7 307 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 RFXAPO00287 272 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 PGK2P07205 417 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 CERKLQ49MI3 558 aaPredicted RBP17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 OTOP2Q7RTS6 562 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 FAM126BQ8IXS8 530 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 CDCA7LQ96GN5 454 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 GLT1D1Q96MS3 346 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 NEUROD6Q96NK8 337 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
NKX3-1-202ENST00000523261 ARVCFO00192 962 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 GUCY1A2P33402 732 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 ZNF792Q3KQV3 632 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 KRT40Q6A162 431 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 HLA-CQ95604 372 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 EHD4Q9H223 541 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 SERPINB13Q9UIV8 391 aa17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 DIS3Q9Y2L1 958 aaKnown RBP17.03■□□□□ 0.32
NKX3-1-202ENST00000523261 CACNA1AO00555 2505 aa17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 A0A1W2PRG0 241 aa17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 CST5P28325 142 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 DSG3P32926 999 aa17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 IRX5P78411 483 aaPredicted RBP17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 GORABQ5T7V8 394 aa17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 CABP5Q9NP86 173 aa17.02■□□□□ 0.32
NKX3-1-202ENST00000523261 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 TLR3O15455 904 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 CD4P01730 458 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 ASGR1P07306 291 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 DYNLL1P63167 89 aaKnown RBP17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 MMP19Q99542 508 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 SLC4A7Q9Y6M7 1214 aa17.01■□□□□ 0.31
NKX3-1-202ENST00000523261 UMODL1Q5DID0 1318 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 WDFY4Q6ZS81 3184 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 EPOPA6NHQ4 379 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 SLC25A27O95847 323 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 SHMT1P34896 483 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 SEPT2Q15019 361 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 VTI1AQ96AJ9 217 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 FAM184BQ9ULE4 1060 aa17■□□□□ 0.31
NKX3-1-202ENST00000523261 PARP14Q460N5 1801 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 UQCRFS1P1P0C7P4 283 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 TMEM132BQ14DG7 1078 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 PCSK9Q8NBP7 692 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 FBXL18Q96ME1 805 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 HIPK3Q9H422 1215 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 CERS4Q9HA82 394 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 SNRKQ9NRH2 765 aa16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
NKX3-1-202ENST00000523261 COL11A1P12107 1806 aaPredicted RBP16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 FLOT1O75955 427 aa16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 SNAI1O95863 264 aaPredicted RBP16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 CA3P07451 260 aa16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 C6orf222P0C671 652 aaPredicted RBP16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 ATP2A2P16615 1042 aaKnown RBP16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 VWCEQ96DN2 955 aa16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 UIMC1Q96RL1 719 aa16.98■□□□□ 0.31
NKX3-1-202ENST00000523261 ADCY6O43306 1168 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 CCL23P55773 120 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 KCTD2Q14681 263 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 RIOX2Q8IUF8 465 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 UPF3AQ9H1J1 476 aaKnown RBP16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 KCNH6Q9H252 994 aa16.97■□□□□ 0.31
NKX3-1-202ENST00000523261 ZBBXA8MT70 800 aa16.96■□□□□ 0.31
NKX3-1-202ENST00000523261 CYP2E1P05181 493 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms