RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 STRNO43815 780 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 ERCC3P19447 782 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 CCND3P30281 292 aaPredicted RBP14.76□□□□□ -0.05
VEGFA-223ENST00000523125 PPARAQ07869 468 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 FAM83BQ5T0W9 1011 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 ZNF444Q8N0Y2 327 aaPredicted RBP14.76□□□□□ -0.05
VEGFA-223ENST00000523125 ANKLE1Q8NAG6 615 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 DPF3Q92784 378 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 NUP88Q99567 741 aaPredicted RBP14.76□□□□□ -0.05
VEGFA-223ENST00000523125 HTATIP2Q9BUP3 242 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 NACAP1Q9BZK3 213 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 NAPBQ9H115 298 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 OGDHLQ9ULD0 1010 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 SMCHD1A6NHR9 2005 aa14.76□□□□□ -0.05
VEGFA-223ENST00000523125 PLIN4Q96Q06 1357 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 F5H6K3 240 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 COBLO75128 1261 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 ADORA2AP29274 412 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 KLRC3Q07444 240 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 PLS1Q14651 629 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 LHX8Q68G74 356 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 B4GALNT3Q6L9W6 998 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 SAMD1Q6SPF0 538 aaPredicted RBP14.75□□□□□ -0.05
VEGFA-223ENST00000523125 REPS2Q8NFH8 660 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 MKL1Q969V6 931 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 FAM227BQ96M60 508 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 MROH8Q9H579 483 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 ZNF287Q9HBT7 754 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 HELLSQ9NRZ9 838 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 MTMR4Q9NYA4 1195 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 PPP1R9AQ9ULJ8 1098 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 TACC3Q9Y6A5 838 aa14.75□□□□□ -0.05
VEGFA-223ENST00000523125 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 VWA5AO00534 786 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 RAD21O60216 631 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 NDUFB10O96000 172 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 NUCB1Q02818 461 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 PDE4BQ07343 736 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 HABP4Q5JVS0 413 aaKnown RBP14.74□□□□□ -0.05
VEGFA-223ENST00000523125 CHD1LQ86WJ1 897 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 TICAM2Q86XR7 235 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 PLEKHM2Q8IWE5 1019 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 NEDD1Q8NHV4 660 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 INCENPQ9NQS7 918 aa14.74□□□□□ -0.05
VEGFA-223ENST00000523125 ZNF214Q9UL59 606 aaPredicted RBP14.74□□□□□ -0.05
VEGFA-223ENST00000523125 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.74□□□□□ -0.052e-6■□□□□ 9
VEGFA-223ENST00000523125 SUPT16HQ9Y5B9 1047 aaKnown RBP14.74□□□□□ -0.05
VEGFA-223ENST00000523125 CYP2C19P33261 490 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 TFAP4Q01664 338 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 CTDSPL2Q05D32 466 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 ALX1Q15699 326 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 FAM47AQ5JRC9 791 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 MFSD14CQ5VZR4 134 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 NECAB2Q7Z6G3 386 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 NCAPG2Q86XI2 1143 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 RIOX2Q8IUF8 465 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 ABRAQ8N0Z2 381 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 TRPV1Q8NER1 839 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 OSBPL3Q9H4L5 887 aa14.73□□□□□ -0.05
VEGFA-223ENST00000523125 COLQQ9Y215 455 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-223ENST00000523125 SLC25A27O95847 323 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 TTLL1O95922 423 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 TSPY3P0CV98 308 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 TSPY8P0CW00 308 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 MCMDC2Q4G0Z9 681 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 OLFML2BQ68BL8 750 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 DPP9Q86TI2 863 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 GMCL1P1Q8NEA9 526 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 SLF1Q9BQI6 1058 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 NBPF3Q9H094 633 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 ANAPC4Q9UJX5 808 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 SYNPO2Q9UMS6 1093 aa14.72□□□□□ -0.05
VEGFA-223ENST00000523125 LAMA4Q16363 1823 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 MCM3APO60318 1980 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 FGAP02671 866 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 SLC3A2P08195 630 aaKnown RBP14.71□□□□□ -0.05
VEGFA-223ENST00000523125 FGRP09769 529 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 CYBAP13498 195 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 STAT3P40763 770 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 NMIQ13287 307 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-223ENST00000523125 ZNF589Q86UQ0 364 aaPredicted RBP14.71□□□□□ -0.05
VEGFA-223ENST00000523125 LRRC47Q8N1G4 583 aaKnown RBP14.71□□□□□ -0.05
VEGFA-223ENST00000523125 PRPF38AQ8NAV1 312 aaKnown RBP14.71□□□□□ -0.05
VEGFA-223ENST00000523125 IL17RBQ9NRM6 502 aa14.71□□□□□ -0.05
VEGFA-223ENST00000523125 TRIOBPQ9H2D6 2365 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 PFASO15067 1338 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 TRIM6-TRIM34B2RNG4 842 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 EVI5O60447 810 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 COL6A1P12109 1028 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 FCER1AP12319 257 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 MAML3Q96JK9 1138 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 RIPK3Q9Y572 518 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 NR2E3Q9Y5X4 410 aa14.7□□□□□ -0.06
VEGFA-223ENST00000523125 ORC4O43929 436 aa14.69□□□□□ -0.06
VEGFA-223ENST00000523125 NMT2O60551 498 aa14.69□□□□□ -0.06
VEGFA-223ENST00000523125 HSPD1P10809 573 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms