RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 BADQ92934 168 aa18.05■□□□□ 0.48
PCM1-218ENST00000523055 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
PCM1-218ENST00000523055 FOSL2P15408 326 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 CDK8P49336 464 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 SNX17Q15036 470 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 SLC39A5Q6ZMH5 540 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 PLEKHM2Q8IWE5 1019 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 GTF3C2Q8WUA4 911 aaPredicted RBP18.04■□□□□ 0.48
PCM1-218ENST00000523055 SYMPKQ92797 1274 aaKnown RBP18.04■□□□□ 0.48
PCM1-218ENST00000523055 EVI5LQ96CN4 794 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 DDRGK1Q96HY6 314 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 FEZ1Q99689 392 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 CABP5Q9NP86 173 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 ARPP21Q9UBL0 812 aaPredicted RBP18.04■□□□□ 0.48
PCM1-218ENST00000523055 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 ATP11BQ9Y2G3 1177 aa18.04■□□□□ 0.48
PCM1-218ENST00000523055 A0A1W2PRG0 241 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 TRIM43BA6NCK2 446 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 MSCO60682 206 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 CYBAP13498 195 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 PTPREP23469 700 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 CYP2C19P33261 490 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 GJC2Q5T442 439 aaPredicted RBP18.03■□□□□ 0.48
PCM1-218ENST00000523055 MFSD14CQ5VZR4 134 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 SH3RF1Q7Z6J0 888 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 AMOTL1Q8IY63 956 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 TRIM43Q96BQ3 446 aaPredicted RBP18.03■□□□□ 0.48
PCM1-218ENST00000523055 PDLIM7Q9NR12 457 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 RABGAP1Q9Y3P9 1069 aa18.03■□□□□ 0.48
PCM1-218ENST00000523055 COL11A1P12107 1806 aaPredicted RBP18.03■□□□□ 0.48
PCM1-218ENST00000523055 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
PCM1-218ENST00000523055 FOXP2O15409 715 aa18.02■□□□□ 0.48
PCM1-218ENST00000523055 TDO2P48775 406 aa18.02■□□□□ 0.48
PCM1-218ENST00000523055 GRB14Q14449 540 aa18.02■□□□□ 0.48
PCM1-218ENST00000523055 LRRFIP1Q32MZ4 808 aaKnown RBP18.02■□□□□ 0.48
PCM1-218ENST00000523055 CCAR1Q8IX12 1150 aaKnown RBP18.02■□□□□ 0.48
PCM1-218ENST00000523055 ROBO3Q96MS0 1386 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 A0A0D9SFI3 127 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 SLC15A5A6NIM6 579 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 APPP05067 770 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 ITGB8P26012 769 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 TRIM60Q495X7 471 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 SBK1Q52WX2 424 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 USP17L2Q6R6M4 530 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 IFNL3Q8IZI9 196 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 C12orf42Q96LP6 360 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 FAM227BQ96M60 508 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 KIAA1683Q9H0B3 1180 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 BTBD7Q9P203 1132 aa18.01■□□□□ 0.47
PCM1-218ENST00000523055 TRIM6-TRIM34B2RNG4 842 aa18■□□□□ 0.47
PCM1-218ENST00000523055 GNAT2P19087 354 aa18■□□□□ 0.47
PCM1-218ENST00000523055 PDE4AP27815 886 aa18■□□□□ 0.47
PCM1-218ENST00000523055 CNGA1P29973 690 aa18■□□□□ 0.47
PCM1-218ENST00000523055 EPHB4P54760 987 aa18■□□□□ 0.47
PCM1-218ENST00000523055 TJAP1Q5JTD0 557 aa18■□□□□ 0.47
PCM1-218ENST00000523055 VPS53Q5VIR6 699 aa18■□□□□ 0.47
PCM1-218ENST00000523055 GIMAP6Q6P9H5 292 aa18■□□□□ 0.47
PCM1-218ENST00000523055 TMEM179Q6ZVK1 233 aa18■□□□□ 0.47
PCM1-218ENST00000523055 SIAH1Q8IUQ4 282 aa18■□□□□ 0.47
PCM1-218ENST00000523055 RILPL2Q969X0 211 aa18■□□□□ 0.47
PCM1-218ENST00000523055 A0A0G2JMZ2 1700 aa18■□□□□ 0.47
PCM1-218ENST00000523055 TMEM265A0A087WTH1 108 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
PCM1-218ENST00000523055 VCAM1P19320 739 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 GRIN2CQ14957 1233 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 KIAA1755Q5JYT7 1200 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 LBX2Q6XYB7 198 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 OSBPL3Q9H4L5 887 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 PRDM5Q9NQX1 630 aaPredicted RBP17.99■□□□□ 0.47
PCM1-218ENST00000523055 LAMA4Q16363 1823 aa17.99■□□□□ 0.47
PCM1-218ENST00000523055 TNFRSF10AO00220 468 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 RASA1P20936 1047 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 ATP2B2Q01814 1243 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 ICA1Q05084 483 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
PCM1-218ENST00000523055 C1orf53Q5VUE5 145 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 CATSPERGQ6ZRH7 1159 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L15C9J2P7 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L13C9JLJ4 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L11C9JVI0 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L18D6R9N7 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L22D6RA61 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L17D6RBQ6 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L19D6RCP7 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L20D6RJB6 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 PRDM1O75626 825 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 CCNA1P78396 465 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 USP17L24Q0WX57 530 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 ANO1Q5XXA6 986 aa17.98■□□□□ 0.47
PCM1-218ENST00000523055 ZNF589Q86UQ0 364 aaPredicted RBP17.98■□□□□ 0.47
PCM1-218ENST00000523055 MYO9BQ13459 2157 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 USP14P54578 494 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 WDR78Q5VTH9 848 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 ARRDC4Q8NCT1 418 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 CCDC17Q96LX7 622 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 NAPBQ9H115 298 aa17.97■□□□□ 0.47
PCM1-218ENST00000523055 SPDYE16A6NNV3 312 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms