RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 SEC63Q9UGP8 760 aaKnown RBP11.13□□□□□ -0.63
SPARC-205ENST00000522348 SYNPO2Q9UMS6 1093 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 PCDHA4Q9UN74 947 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 MTMR7Q9Y216 660 aa11.13□□□□□ -0.63
SPARC-205ENST00000522348 SCN9AQ15858 1988 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 FOCADQ5VW36 1801 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 CLRN2A0PK11 232 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 WNT10BO00744 389 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 CYTH3O43739 400 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 NR1I2O75469 434 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 GOLGA8HP0CJ92 632 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 GNA11P29992 359 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 TOB1P50616 345 aaPredicted RBP11.12□□□□□ -0.63
SPARC-205ENST00000522348 ATP2B2Q01814 1243 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 FAM160A1Q05DH4 1040 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 NR5A1Q13285 461 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 AXDND1Q5T1B0 1012 aaPredicted RBP11.12□□□□□ -0.63
SPARC-205ENST00000522348 BLIDQ8IZY5 108 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 DAGLBQ8NCG7 672 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 PIBF1Q8WXW3 757 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
SPARC-205ENST00000522348 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 VEZTQ9HBM0 779 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 C6orf50Q9HD87 102 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 CDK5RAP2Q96SN8 1893 aa11.12□□□□□ -0.63
SPARC-205ENST00000522348 KINO60870 393 aaKnown RBP11.11□□□□□ -0.63
SPARC-205ENST00000522348 CCDC192P0DO97 292 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
SPARC-205ENST00000522348 YBX3P16989 372 aaKnown RBP eCLIP11.11□□□□□ -0.63
SPARC-205ENST00000522348 MAP3K10Q02779 954 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 SNW1Q13573 536 aaKnown RBP11.11□□□□□ -0.63
SPARC-205ENST00000522348 TNFAIP1Q13829 316 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 UVSSAQ2YD98 709 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
SPARC-205ENST00000522348 KRI1Q8N9T8 703 aaKnown RBP11.11□□□□□ -0.63
SPARC-205ENST00000522348 TNFRSF25Q93038 417 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 SHISA4Q96DD7 197 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
SPARC-205ENST00000522348 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 STXBP3O00186 592 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 VEGFAP15692 232 aaPredicted RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 MARCKSP29966 332 aaPredicted RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 ICA1Q05084 483 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 SEPT2Q15019 361 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 NPY5RQ15761 445 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 CAMK4Q16566 473 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 SLC35G1Q2M3R5 365 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 NBPF9Q3BBW0 867 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 SLFN13Q68D06 897 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 WWC2Q6AWC2 1192 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 RBM43Q6ZSC3 357 aaKnown RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 HEATR3Q7Z4Q2 680 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 ZNF579Q8NAF0 562 aaKnown RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 GMCL1P1Q8NEA9 526 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 TIGD1Q96MW7 591 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 PIGSQ96S52 555 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 UBA5Q9GZZ9 404 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 ZMYND12Q9H0C1 365 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 GPCPD1Q9NPB8 672 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 CNOT7Q9UIV1 285 aaKnown RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 SRPRBQ9Y5M8 271 aaKnown RBP11.1□□□□□ -0.63
SPARC-205ENST00000522348 CNTNAP1P78357 1384 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 COL4A5P29400 1685 aa11.1□□□□□ -0.63
SPARC-205ENST00000522348 TCHHQ07283 1943 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 FAM237AA0A1B0GTK4 181 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 CCDC194A0A1B0GVG4 234 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 A0A1B0GVL5 298 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 ESYT2A0FGR8 921 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 SMCO2A6NFE2 343 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 F5H6K3 240 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 H7C1D1 291 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 CAVIN2O95810 425 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 LMNB1P20700 586 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 PTPREP23469 700 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 SLC1A4P43007 532 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 GMPSP49915 693 aaPredicted RBP11.09□□□□□ -0.63
SPARC-205ENST00000522348 NAPAP54920 295 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 KLRC3Q07444 240 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 RESP18Q5W5W9 173 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 SASS6Q6UVJ0 657 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
SPARC-205ENST00000522348 GPKOWQ92917 476 aaPredicted RBP eCLIP11.09□□□□□ -0.63
SPARC-205ENST00000522348 FERMT2Q96AC1 680 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 SDF4Q9BRK5 362 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 GOLPH3LQ9H4A5 285 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
SPARC-205ENST00000522348 ARHGEF10LQ9HCE6 1279 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms