RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SHCBP1Q8NEM2 672 aa24.7■■□□□ 1.54
SDCBP-209ENST00000522243 NUP88Q99567 741 aaPredicted RBP24.7■■□□□ 1.54
SDCBP-209ENST00000522243 NAPBQ9H115 298 aa24.7■■□□□ 1.54
SDCBP-209ENST00000522243 CYP2C19P33261 490 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 TMEM132BQ14DG7 1078 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 NBPF3Q9H094 633 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 NYAP2Q9P242 653 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 CLIP2Q9UDT6 1046 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 STAP2Q9UGK3 403 aa24.69■■□□□ 1.54
SDCBP-209ENST00000522243 FRMPD3Q5JV73 1810 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 ZNF236Q9UL36 1845 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 STRNO43815 780 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 LHX8Q68G74 356 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 B4GALNT3Q6L9W6 998 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 EVI5LQ96CN4 794 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 LNPKQ9C0E8 428 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 MROH8Q9H579 483 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 C11orf49Q9H6J7 331 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 ZNF287Q9HBT7 754 aa24.68■■□□□ 1.54
SDCBP-209ENST00000522243 ZNFX1Q9P2E3 1918 aaKnown RBP24.68■■□□□ 1.54
SDCBP-209ENST00000522243 IGKV6D-41A0A0C4DH26 115 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 F5H6K3 240 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 COBLO75128 1261 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 CNGA1P29973 690 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 KLRC3Q07444 240 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 PPARAQ07869 468 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 PPP1R9AQ9ULJ8 1098 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 ADAMTS5Q9UNA0 930 aa24.67■■□□□ 1.54
SDCBP-209ENST00000522243 NDUFB10O96000 172 aa24.66■■□□□ 1.54
SDCBP-209ENST00000522243 FAM47AQ5JRC9 791 aa24.66■■□□□ 1.54
SDCBP-209ENST00000522243 EXOC6Q8TAG9 804 aa24.66■■□□□ 1.54
SDCBP-209ENST00000522243 CEP95Q96GE4 821 aa24.66■■□□□ 1.54
SDCBP-209ENST00000522243 VWA5AO00534 786 aa24.65■■□□□ 1.54
SDCBP-209ENST00000522243 PDE4BQ07343 736 aa24.65■■□□□ 1.54
SDCBP-209ENST00000522243 TRPV1Q8NER1 839 aa24.65■■□□□ 1.54
SDCBP-209ENST00000522243 FOXP2O15409 715 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 SLC25A27O95847 323 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 SLC3A2P08195 630 aaKnown RBP24.64■■□□□ 1.54
SDCBP-209ENST00000522243 TSPY3P0CV98 308 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 TSPY8P0CW00 308 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 CTDSPL2Q05D32 466 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 VPS53Q5VIR6 699 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 RIOX2Q8IUF8 465 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 C7orf61Q8IZ16 206 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 LRRC47Q8N1G4 583 aaKnown RBP24.64■■□□□ 1.54
SDCBP-209ENST00000522243 RWDD1Q9H446 243 aaPredicted RBP24.64■■□□□ 1.54
SDCBP-209ENST00000522243 INCENPQ9NQS7 918 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 MTMR4Q9NYA4 1195 aa24.64■■□□□ 1.54
SDCBP-209ENST00000522243 RBM27Q9P2N5 1060 aaKnown RBP24.64■■□□□ 1.54
SDCBP-209ENST00000522243 PFASO15067 1338 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 IGHDP01880 384 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 FCER1AP12319 257 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 STAT3P40763 770 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 TFAP4Q01664 338 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 AAMPQ13685 434 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 REPS2Q8NFH8 660 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 NEDD1Q8NHV4 660 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 SLF1Q9BQI6 1058 aa24.63■■□□□ 1.53
SDCBP-209ENST00000522243 DDX20Q9UHI6 824 aaKnown RBP24.63■■□□□ 1.53
SDCBP-209ENST00000522243 IGHA2P01877 340 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 CYBAP13498 195 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 FXR1P51114 621 aaKnown RBP eCLIP24.62■■□□□ 1.53
SDCBP-209ENST00000522243 OLFML2BQ68BL8 750 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 SMC5Q8IY18 1101 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 ABRAQ8N0Z2 381 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 MKL1Q969V6 931 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 FAM227BQ96M60 508 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 MMP19Q99542 508 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 SLC5A4Q9NY91 659 aa24.62■■□□□ 1.53
SDCBP-209ENST00000522243 ZNF214Q9UL59 606 aaPredicted RBP24.62■■□□□ 1.53
SDCBP-209ENST00000522243 TRIM6-TRIM34B2RNG4 842 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 TTLL1O95922 423 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 SLC4A3P48751 1232 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 PRAMEF19Q5SWL8 479 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 ANO1Q5XXA6 986 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 CHMP4CQ96CF2 233 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 HELLSQ9NRZ9 838 aa24.61■■□□□ 1.53
SDCBP-209ENST00000522243 ZMYND8Q9ULU4 1186 aaPredicted RBP24.61■■□□□ 1.53
SDCBP-209ENST00000522243 PLXNA1Q9UIW2 1896 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 PLIN4Q96Q06 1357 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 A0A0D9SFI3 127 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 PGK2P07205 417 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 RILPL2Q969X0 211 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 MAML3Q96JK9 1138 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 TACC3Q9Y6A5 838 aa24.6■■□□□ 1.53
SDCBP-209ENST00000522243 COL6A1P12109 1028 aa24.59■■□□□ 1.53
SDCBP-209ENST00000522243 KCTD2Q14681 263 aa24.59■■□□□ 1.53
SDCBP-209ENST00000522243 CPXCR1Q8N123 301 aa24.59■■□□□ 1.53
SDCBP-209ENST00000522243 PRPF38AQ8NAV1 312 aaKnown RBP24.59■■□□□ 1.53
SDCBP-209ENST00000522243 KIFC2Q96AC6 838 aa24.59■■□□□ 1.53
SDCBP-209ENST00000522243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.59■■□□□ 1.53
SDCBP-209ENST00000522243 MSCO60682 206 aa24.58■■□□□ 1.53
SDCBP-209ENST00000522243 SYN1P17600 705 aa24.58■■□□□ 1.53
SDCBP-209ENST00000522243 NMIQ13287 307 aaPredicted RBP24.58■■□□□ 1.53
SDCBP-209ENST00000522243 SLFN13Q68D06 897 aa24.58■■□□□ 1.53
SDCBP-209ENST00000522243 SNRNP48Q6IEG0 339 aaKnown RBP24.58■■□□□ 1.53
SDCBP-209ENST00000522243 CHD1LQ86WJ1 897 aa24.58■■□□□ 1.53
SDCBP-209ENST00000522243 PRO3102Q9H379 93 aa24.58■■□□□ 1.53
SDCBP-209ENST00000522243 ISY1Q9ULR0 285 aaKnown RBP24.58■■□□□ 1.53
SDCBP-209ENST00000522243 RIPK3Q9Y572 518 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms