RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 TTMPQ5BVD1 217 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 KCTD16Q68DU8 428 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 ATG9AQ7Z3C6 839 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 KIAA1328Q86T90 577 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 RAPGEF4Q8WZA2 1011 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 PDE2AO00408 941 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 COBLO75128 1261 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 EPB41P11171 864 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 NAP1L1P55209 391 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 FOXO4P98177 505 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 ACTN3Q08043 901 aaPredicted RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 SAFBQ15424 915 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 CHRNA2Q15822 529 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 TSR1Q2NL82 804 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 LRRC24Q50LG9 513 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 NAA35Q5VZE5 725 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 USP49Q70CQ1 688 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 CCDC13Q8IYE1 715 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 VCPKMTQ9H867 229 aa10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 PHRF1Q9P1Y6 1649 aaKnown RBP10.76□□□□□ -0.69
CTNNA1-230ENST00000521724 TMCO5BA8MYB1 307 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 IDEP14735 1019 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 CASP1P29466 404 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 LSP1P33241 339 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 TOB1P50616 345 aaPredicted RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 ALS2CLQ60I27 953 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 TTLL7Q6ZT98 887 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 TEX11Q8IYF3 940 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 SH2D3CQ8N5H7 860 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 NBPF15Q8N660 670 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 EPN3Q9H201 632 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 SLIT3O75094 1523 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 MEGF6O75095 1541 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 RASSF9O75901 435 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 PAX7P23759 505 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 CALRP27797 417 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 NNTQ13423 1086 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 RILPL1Q5EBL4 403 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 WLSQ5T9L3 541 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 APOA5Q6Q788 366 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 CEP120Q8N960 986 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 OR8K1Q8NGG5 319 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 HDAC7Q8WUI4 952 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 FAXDC2Q96IV6 333 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 PUS3Q9BZE2 481 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 POLD4Q9HCU8 107 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 TAB2Q9NYJ8 693 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 DMGDHQ9UI17 866 aaKnown RBP10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 CTNND2Q9UQB3 1225 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 UBN2Q6ZU65 1347 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 CPDO75976 1380 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 NWD2Q9ULI1 1742 aa10.75□□□□□ -0.69
CTNNA1-230ENST00000521724 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 FOXP2O15409 715 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 KRT14P02533 472 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 SNRPA1P09661 255 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 EPHB4P54760 987 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 KRT83P78385 493 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 GUCY1A3Q02108 690 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 UBXN1Q04323 297 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 IFT88Q13099 833 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 NFXL1Q6ZNB6 911 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 GSDMAQ96QA5 445 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 LRRC1Q9BTT6 524 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 SLC26A6Q9BXS9 759 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 CSRNP2Q9H175 543 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 PCDHB6Q9Y5E3 794 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 SRPRBQ9Y5M8 271 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 LRRC10BA6NIK2 292 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 PPP1R3GB7ZBB8 358 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 PATL2C9JE40 543 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 ZBTB43O43298 467 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 IPO7O95373 1038 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 ERCC3P19447 782 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 COPB1P53618 953 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 HERVK_113P62684 666 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 CRYMQ14894 314 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 EZH2Q15910 746 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 SNCBQ16143 134 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 PROSER2Q86WR7 435 aaPredicted RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 FMNL3Q8IVF7 1028 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 DIS3L2Q8IYB7 885 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 WDR17Q8IZU2 1322 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 TSEN2Q8NCE0 465 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 WDR19Q8NEZ3 1342 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 ZNF473Q8WTR7 871 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 TBC1D22AQ8WUA7 517 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 SLC40A1Q9NP59 571 aa10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 LIMA1Q9UHB6 759 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 LUC7L2Q9Y383 392 aaKnown RBP10.74□□□□□ -0.69
CTNNA1-230ENST00000521724 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
CTNNA1-230ENST00000521724 A0A1B0GUA9 196 aa10.73□□□□□ -0.69
CTNNA1-230ENST00000521724 TTC26A0AVF1 554 aa10.73□□□□□ -0.69
CTNNA1-230ENST00000521724 ANO9A1A5B4 782 aa10.73□□□□□ -0.69
CTNNA1-230ENST00000521724 EZRP15311 586 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms