RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 CTR9Q6PD62 1173 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 EXOC6Q8TAG9 804 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 LPAR1Q92633 364 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 OSBP2Q969R2 916 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 ASCC2Q9H1I8 757 aaPredicted RBP12.18□□□□□ -0.46
TRIM35-204ENST00000521283 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 HELLSQ9NRZ9 838 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
TRIM35-204ENST00000521283 GSG1L2A8MUP6 293 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 MPHOSPH10O00566 681 aaKnown RBP12.17□□□□□ -0.46
TRIM35-204ENST00000521283 PRKAB2O43741 272 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 APPP05067 770 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 TDO2P48775 406 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 CDK8P49336 464 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 IRF5Q13568 498 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 ZMYM1Q5SVZ6 1142 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 RAET1EQ8TD07 263 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 TRIM47Q96LD4 638 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 HOXC10Q9NYD6 342 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 SYNPO2Q9UMS6 1093 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 ROBO3Q96MS0 1386 aa12.17□□□□□ -0.46
TRIM35-204ENST00000521283 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 RBBP6Q7Z6E9 1792 aaKnown RBP12.16□□□□□ -0.46
TRIM35-204ENST00000521283 HIP1O00291 1037 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
TRIM35-204ENST00000521283 NT5C2P49902 561 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 HERVK_113P62684 666 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 UBXN2AP68543 259 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 CCNA1P78396 465 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 PDE4BQ07343 736 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 TSHZ3Q63HK5 1081 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 LBX2Q6XYB7 198 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 CCDC84Q86UT8 332 aaPredicted RBP12.16□□□□□ -0.46
TRIM35-204ENST00000521283 IFNL3Q8IZI9 196 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 GPRC5AQ8NFJ5 357 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 PXYLP1Q8TE99 480 aa12.16□□□□□ -0.46
TRIM35-204ENST00000521283 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
TRIM35-204ENST00000521283 TRIM6-TRIM34B2RNG4 842 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 MAP3K7O43318 606 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 MAPK4P31152 587 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 JAG1P78504 1218 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 SEPT2Q15019 361 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 CATSPERGQ6ZRH7 1159 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
TRIM35-204ENST00000521283 TRMT44Q8IYL2 757 aaKnown RBP12.15□□□□□ -0.46
TRIM35-204ENST00000521283 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
TRIM35-204ENST00000521283 MB21D1Q8N884 522 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 NKX2-3Q8TAU0 364 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 ZNF333Q96JL9 665 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 LNPKQ9C0E8 428 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 NAPBQ9H115 298 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 TMX2Q9Y320 296 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 RABGAP1Q9Y3P9 1069 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 PTCH2Q9Y6C5 1203 aa12.15□□□□□ -0.46
TRIM35-204ENST00000521283 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 VCAM1P19320 739 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 GRK4P32298 578 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 ICA1Q05084 483 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 COG2Q14746 738 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 MCMDC2Q4G0Z9 681 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 ERICH6BQ5W0A0 696 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
TRIM35-204ENST00000521283 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
TRIM35-204ENST00000521283 GOPCQ9HD26 462 aa12.14□□□□□ -0.47
TRIM35-204ENST00000521283 KIAA0100Q14667 2235 aaKnown RBP12.13□□□□□ -0.47
TRIM35-204ENST00000521283 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
TRIM35-204ENST00000521283 IGHDP01880 384 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 CYP2D6P10635 497 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
TRIM35-204ENST00000521283 ALX1Q15699 326 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 SLFNL1Q499Z3 407 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 B4GALNT3Q6L9W6 998 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 PLEKHM2Q8IWE5 1019 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 SOCS4Q8WXH5 440 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 DOCK3Q8IZD9 2030 aa12.13□□□□□ -0.47
TRIM35-204ENST00000521283 ZMYM6O95789 1325 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 M0R2C6 588 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 CHGBP05060 677 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 AKR1B1P15121 316 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 FLT3LGP49771 235 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 ERVK-24P63145 666 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 SLC44A5Q8NCS7 719 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
TRIM35-204ENST00000521283 VCPKMTQ9H867 229 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
TRIM35-204ENST00000521283 STRNO43815 780 aa12.11□□□□□ -0.47
TRIM35-204ENST00000521283 ADCY3O60266 1144 aa12.11□□□□□ -0.47
TRIM35-204ENST00000521283 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
TRIM35-204ENST00000521283 CTGFP29279 349 aa12.11□□□□□ -0.47
TRIM35-204ENST00000521283 SOX10P56693 466 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms