RNA–Protein interactions for RNA: ENST00000520940.1

EXTL3-208, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 4

Gene EXTL3, Length 542 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-208ENST00000520940 LHX8Q68G74 356 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 SEC62Q99442 399 aaKnown RBP12.55□□□□□ -0.4
EXTL3-208ENST00000520940 NACAP1Q9BZK3 213 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
EXTL3-208ENST00000520940 SMCHD1A6NHR9 2005 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 PATL2C9JE40 543 aaKnown RBP12.54□□□□□ -0.4
EXTL3-208ENST00000520940 PRDM1O75626 825 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 FXR1P51114 621 aaKnown RBP eCLIP12.54□□□□□ -0.4
EXTL3-208ENST00000520940 TMEM132BQ14DG7 1078 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 FAM83BQ5T0W9 1011 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 DPP9Q86TI2 863 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 NCAPG2Q86XI2 1143 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 IFNL3Q8IZI9 196 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 MROH8Q9H579 483 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 C11orf49Q9H6J7 331 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 NYAP2Q9P242 653 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 ADAMTS5Q9UNA0 930 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 PFASO15067 1338 aa12.54□□□□□ -0.4
EXTL3-208ENST00000520940 MCM3APO60318 1980 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 IGKV6D-41A0A0C4DH26 115 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 COBLO75128 1261 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 SLC25A27O95847 323 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 NDUFB10O96000 172 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 IGHA2P01877 340 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 CYP2C19P33261 490 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 ABRAQ8N0Z2 381 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 NUP88Q99567 741 aaPredicted RBP12.53□□□□□ -0.4
EXTL3-208ENST00000520940 NAPBQ9H115 298 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 RBM27Q9P2N5 1060 aaKnown RBP12.53□□□□□ -0.4
EXTL3-208ENST00000520940 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
EXTL3-208ENST00000520940 VWA5AO00534 786 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 MSCO60682 206 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 CYBAP13498 195 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 PDE1AP54750 535 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 PDE4BQ07343 736 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 PPARAQ07869 468 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 AAMPQ13685 434 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 CCDC129Q6ZRS4 1044 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 ZNF444Q8N0Y2 327 aaPredicted RBP12.52□□□□□ -0.41
EXTL3-208ENST00000520940 TRPV1Q8NER1 839 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 REPS2Q8NFH8 660 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 EVI5LQ96CN4 794 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 SLF1Q9BQI6 1058 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 SLC5A4Q9NY91 659 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 DDX20Q9UHI6 824 aaKnown RBP12.52□□□□□ -0.41
EXTL3-208ENST00000520940 ZNF214Q9UL59 606 aaPredicted RBP12.52□□□□□ -0.41
EXTL3-208ENST00000520940 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
EXTL3-208ENST00000520940 F5H6K3 240 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 FOXP2O15409 715 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 SLC3A2P08195 630 aaKnown RBP12.51□□□□□ -0.41
EXTL3-208ENST00000520940 COL6A1P12109 1028 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 FCER1AP12319 257 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 CNGA1P29973 690 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 COPB2P35606 906 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 STAT3P40763 770 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 KLRC3Q07444 240 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 RIOX2Q8IUF8 465 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 LRRC47Q8N1G4 583 aaKnown RBP12.51□□□□□ -0.41
EXTL3-208ENST00000520940 MMP19Q99542 508 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 MTMR4Q9NYA4 1195 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 SYNPO2Q9UMS6 1093 aa12.51□□□□□ -0.41
EXTL3-208ENST00000520940 TTLL1O95922 423 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 TSPY3P0CV98 308 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 TSPY8P0CW00 308 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 GMCL1P1Q8NEA9 526 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 NEDD1Q8NHV4 660 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 MAML3Q96JK9 1138 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 PCDH10Q9P2E7 1040 aa12.5□□□□□ -0.41
EXTL3-208ENST00000520940 ZMYND8Q9ULU4 1186 aaPredicted RBP12.5□□□□□ -0.41
EXTL3-208ENST00000520940 VPS53Q5VIR6 699 aa12.49□□□□□ -0.41
EXTL3-208ENST00000520940 SNRNP48Q6IEG0 339 aaKnown RBP12.49□□□□□ -0.41
EXTL3-208ENST00000520940 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
EXTL3-208ENST00000520940 MKL1Q969V6 931 aa12.49□□□□□ -0.41
EXTL3-208ENST00000520940 TEX13BQ9BXU2 312 aa12.49□□□□□ -0.41
EXTL3-208ENST00000520940 HELLSQ9NRZ9 838 aa12.49□□□□□ -0.41
EXTL3-208ENST00000520940 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
EXTL3-208ENST00000520940 LTBP2Q14767 1821 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 A0A0D9SFI3 127 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 SEPT4O43236 478 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 PGK2P07205 417 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 TFAP4Q01664 338 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 CTDSPL2Q05D32 466 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 KCTD2Q14681 263 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
EXTL3-208ENST00000520940 FAM227BQ96M60 508 aa12.48□□□□□ -0.41
EXTL3-208ENST00000520940 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
EXTL3-208ENST00000520940 LAMA2P24043 3122 aaKnown RBP12.47□□□□□ -0.41
EXTL3-208ENST00000520940 A0A1W2PPC1 479 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms