RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 MINDY4BA8MYZ0 360 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 GPAA1O43292 621 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 SLC25A27O95847 323 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 RASA1P20936 1047 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 LRRC26Q2I0M4 334 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 MKNK2Q9HBH9 465 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 SLC5A4Q9NY91 659 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 TTC41PQ6P2S7 1318 aa23.52■■□□□ 1.36
PABPC1-215ENST00000520804 COL11A1P12107 1806 aaPredicted RBP23.52■■□□□ 1.36
PABPC1-215ENST00000520804 GNAT2P19087 354 aa23.51■■□□□ 1.35
PABPC1-215ENST00000520804 STK11IPQ8N1F8 1099 aa23.51■■□□□ 1.35
PABPC1-215ENST00000520804 EPB41L4AQ9HCS5 686 aaPredicted RBP23.51■■□□□ 1.35
PABPC1-215ENST00000520804 PPP1R9AQ9ULJ8 1098 aa23.51■■□□□ 1.35
PABPC1-215ENST00000520804 M0R2C6 588 aa23.5■■□□□ 1.35
PABPC1-215ENST00000520804 FCER1AP12319 257 aa23.5■■□□□ 1.35
PABPC1-215ENST00000520804 MAGEA10P43363 369 aaPredicted RBP23.5■■□□□ 1.35
PABPC1-215ENST00000520804 LRRFIP1Q32MZ4 808 aaKnown RBP23.5■■□□□ 1.35
PABPC1-215ENST00000520804 FAM83BQ5T0W9 1011 aa23.5■■□□□ 1.35
PABPC1-215ENST00000520804 DNM1LO00429 736 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 VWA5AO00534 786 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 SOX1O00570 391 aaPredicted RBP23.49■■□□□ 1.35
PABPC1-215ENST00000520804 RAD21O60216 631 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 TDO2P48775 406 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 RIOX2Q8IUF8 465 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 PI4K2BQ8TCG2 481 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 MAML3Q96JK9 1138 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
PABPC1-215ENST00000520804 NYAP2Q9P242 653 aa23.49■■□□□ 1.35
PABPC1-215ENST00000520804 ERC2O15083 957 aa23.48■■□□□ 1.35
PABPC1-215ENST00000520804 REPS2Q8NFH8 660 aa23.48■■□□□ 1.35
PABPC1-215ENST00000520804 ZNF214Q9UL59 606 aaPredicted RBP23.48■■□□□ 1.35
PABPC1-215ENST00000520804 PATL2C9JE40 543 aaKnown RBP23.47■■□□□ 1.35
PABPC1-215ENST00000520804 SEPT4O43236 478 aa23.47■■□□□ 1.35
PABPC1-215ENST00000520804 APPP05067 770 aa23.47■■□□□ 1.35
PABPC1-215ENST00000520804 STAT3P40763 770 aa23.47■■□□□ 1.35
PABPC1-215ENST00000520804 OTUD7AQ8TE49 926 aaPredicted RBP23.47■■□□□ 1.35
PABPC1-215ENST00000520804 LRCH3Q96II8 777 aa23.47■■□□□ 1.35
PABPC1-215ENST00000520804 MMP19Q99542 508 aa23.47■■□□□ 1.35
PABPC1-215ENST00000520804 ZNFX1Q9P2E3 1918 aaKnown RBP23.47■■□□□ 1.35
PABPC1-215ENST00000520804 IGKV6D-41A0A0C4DH26 115 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 F5H6K3 240 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 KLRC3Q07444 240 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 PRAMEF19Q5SWL8 479 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 IFNL3Q8IZI9 196 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 ARRDC4Q8NCT1 418 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 NUP88Q99567 741 aaPredicted RBP23.46■■□□□ 1.35
PABPC1-215ENST00000520804 ZNF287Q9HBT7 754 aa23.46■■□□□ 1.35
PABPC1-215ENST00000520804 NDUFB10O96000 172 aa23.45■■□□□ 1.34
PABPC1-215ENST00000520804 COPB2P35606 906 aa23.45■■□□□ 1.34
PABPC1-215ENST00000520804 GJC2Q5T442 439 aaPredicted RBP23.45■■□□□ 1.34
PABPC1-215ENST00000520804 ANO1Q5XXA6 986 aa23.45■■□□□ 1.34
PABPC1-215ENST00000520804 ZNF444Q8N0Y2 327 aaPredicted RBP23.45■■□□□ 1.34
PABPC1-215ENST00000520804 SEC62Q99442 399 aaKnown RBP23.45■■□□□ 1.34
PABPC1-215ENST00000520804 SLF1Q9BQI6 1058 aa23.45■■□□□ 1.34
PABPC1-215ENST00000520804 CLIP2Q9UDT6 1046 aa23.45■■□□□ 1.34
PABPC1-215ENST00000520804 LAMA3Q16787 3333 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 PRDM1O75626 825 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 PGK2P07205 417 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 ATN1P54259 1190 aaPredicted RBP23.44■■□□□ 1.34
PABPC1-215ENST00000520804 RRP1P56182 461 aaKnown RBP23.44■■□□□ 1.34
PABPC1-215ENST00000520804 KCTD2Q14681 263 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 TDHQ8IZJ6 230 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 FSD1Q9BTV5 496 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 NACAP1Q9BZK3 213 aa23.44■■□□□ 1.34
PABPC1-215ENST00000520804 UBE2OQ9C0C9 1292 aaKnown RBP23.44■■□□□ 1.34
PABPC1-215ENST00000520804 DIS3Q9Y2L1 958 aaKnown RBP23.44■■□□□ 1.34
PABPC1-215ENST00000520804 MX1P20591 662 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 ZNF792Q3KQV3 632 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 ZMYM1Q5SVZ6 1142 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 MKL1Q969V6 931 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 CEP95Q96GE4 821 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 NRBP1Q9UHY1 535 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 MYH4Q9Y623 1939 aa23.43■■□□□ 1.34
PABPC1-215ENST00000520804 KBTBD13C9JR72 458 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 LRIT3Q3SXY7 679 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 PRPF38AQ8NAV1 312 aaKnown RBP23.42■■□□□ 1.34
PABPC1-215ENST00000520804 TEX13BQ9BXU2 312 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 MTMR4Q9NYA4 1195 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 SYNPO2Q9UMS6 1093 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 PLXNA1Q9UIW2 1896 aa23.42■■□□□ 1.34
PABPC1-215ENST00000520804 SALL3Q9BXA9 1300 aa23.41■■□□□ 1.34
PABPC1-215ENST00000520804 MDM2Q00987 491 aaPredicted RBP23.41■■□□□ 1.34
PABPC1-215ENST00000520804 TINF2Q9BSI4 451 aa23.41■■□□□ 1.34
PABPC1-215ENST00000520804 NAPBQ9H115 298 aa23.41■■□□□ 1.34
PABPC1-215ENST00000520804 PLIN4Q96Q06 1357 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 TTLL1O95922 423 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 RTP1P59025 263 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 PDE4BQ07343 736 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 SNRNP48Q6IEG0 339 aaKnown RBP23.4■■□□□ 1.34
PABPC1-215ENST00000520804 GPR153Q6NV75 609 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 NEDD1Q8NHV4 660 aa23.4■■□□□ 1.34
PABPC1-215ENST00000520804 ATP2A1O14983 1001 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 MYCNP04198 464 aaPredicted RBP23.39■■□□□ 1.33
PABPC1-215ENST00000520804 SLC3A2P08195 630 aaKnown RBP23.39■■□□□ 1.33
PABPC1-215ENST00000520804 PPARAQ07869 468 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 LRRC41Q15345 812 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 FAM47AQ5JRC9 791 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 SLC39A5Q6ZMH5 540 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 LRRC47Q8N1G4 583 aaKnown RBP23.39■■□□□ 1.33
PABPC1-215ENST00000520804 GMCL1P1Q8NEA9 526 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms