RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 MYPNQ86TC9 1320 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 CA12O43570 354 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 BMP3P12645 472 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 OSBPP22059 807 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 SLC1A4P43007 532 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 RCAN1P53805 252 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 LBX2Q6XYB7 198 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 CATIPQ7Z7H3 387 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 SPICE1Q8N0Z3 855 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 LRRC2Q9BYS8 371 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 UPF3BQ9BZI7 483 aaKnown RBP20.38■□□□□ 0.85
TRAM1-203ENST00000520700 WBP1LQ9NX94 342 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 HOXC10Q9NYD6 342 aa20.38■□□□□ 0.85
TRAM1-203ENST00000520700 DDAH1O94760 285 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 CALM1P0DP23 149 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 CALM2P0DP24 149 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 CALM3P0DP25 149 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 COG2Q14746 738 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 GPATCH4Q5T3I0 446 aaKnown RBP20.37■□□□□ 0.85
TRAM1-203ENST00000520700 BTNL9Q6UXG8 535 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 Q6ZUG5 572 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 GTF3C2Q8WUA4 911 aaPredicted RBP20.37■□□□□ 0.85
TRAM1-203ENST00000520700 TCEANC2Q96MN5 208 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 ASCC2Q9H1I8 757 aaPredicted RBP20.37■□□□□ 0.85
TRAM1-203ENST00000520700 PDRG1Q9NUG6 133 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 RNF186Q9NXI6 227 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 FEM1BQ9UK73 627 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 ADAMTS5Q9UNA0 930 aa20.37■□□□□ 0.85
TRAM1-203ENST00000520700 CCDC69A6NI79 296 aa20.36■□□□□ 0.85
TRAM1-203ENST00000520700 ZNF543Q08ER8 600 aa20.36■□□□□ 0.85
TRAM1-203ENST00000520700 FAM83BQ5T0W9 1011 aa20.36■□□□□ 0.85
TRAM1-203ENST00000520700 ZNF654Q8IZM8 581 aa20.36■□□□□ 0.85
TRAM1-203ENST00000520700 CHURC1Q8WUH1 139 aa20.36■□□□□ 0.85
TRAM1-203ENST00000520700 PARK7Q99497 189 aaKnown RBP20.36■□□□□ 0.85
TRAM1-203ENST00000520700 CEP350Q5VT06 3117 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 FDX1P10109 184 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 DSG3P32926 999 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 IRX3P78415 501 aaPredicted RBP20.35■□□□□ 0.85
TRAM1-203ENST00000520700 FGD1P98174 961 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 TOB2Q14106 344 aaPredicted RBP20.35■□□□□ 0.85
TRAM1-203ENST00000520700 PPP2R5BQ15173 497 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 RABEP1Q15276 862 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 ANKRD1Q15327 319 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 ASPRV1Q53RT3 343 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 NFXL1Q6ZNB6 911 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 FAM160B2Q86V87 743 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
TRAM1-203ENST00000520700 P2RX7Q99572 595 aaKnown RBP20.35■□□□□ 0.85
TRAM1-203ENST00000520700 ZFYVE28Q9HCC9 887 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 SLC12A7Q9Y666 1083 aa20.35■□□□□ 0.85
TRAM1-203ENST00000520700 ADGRA2Q96PE1 1338 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 PALM3A6NDB9 673 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-203ENST00000520700 RAD21O60216 631 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 GCLCP48506 637 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-203ENST00000520700 NEK4P51957 841 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 GRM4Q14833 912 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 TAF1CQ15572 869 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-203ENST00000520700 NOM1Q5C9Z4 860 aaKnown RBP20.34■□□□□ 0.85
TRAM1-203ENST00000520700 APOA5Q6Q788 366 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 SYNE3Q6ZMZ3 975 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 BRF1Q92994 677 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 NUP88Q99567 741 aaPredicted RBP20.34■□□□□ 0.85
TRAM1-203ENST00000520700 TANGO6Q9C0B7 1094 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 PPP1R9AQ9ULJ8 1098 aa20.34■□□□□ 0.85
TRAM1-203ENST00000520700 TMEM232C9JQI7 657 aa20.33■□□□□ 0.85
TRAM1-203ENST00000520700 TLR2O60603 784 aa20.33■□□□□ 0.85
TRAM1-203ENST00000520700 PARP1P09874 1014 aaKnown RBP20.33■□□□□ 0.85
TRAM1-203ENST00000520700 SMARCA1P28370 1054 aa20.33■□□□□ 0.85
TRAM1-203ENST00000520700 HERVK_113P62684 666 aa20.33■□□□□ 0.85
TRAM1-203ENST00000520700 ZNF274Q96GC6 653 aaPredicted RBP20.33■□□□□ 0.85
TRAM1-203ENST00000520700 SPDYE16A6NNV3 312 aaPredicted RBP20.32■□□□□ 0.84
TRAM1-203ENST00000520700 FLOT1O75955 427 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 CYP2C8P10632 490 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 KIF5BP33176 963 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 STAT2P52630 851 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 C17orf99Q6UX52 265 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 MB21D1Q8N884 522 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 FANCBQ8NB91 859 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 SLF1Q9BQI6 1058 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 BEGAINQ9BUH8 593 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 MAD2L2Q9UI95 211 aa20.32■□□□□ 0.84
TRAM1-203ENST00000520700 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 ZBTB43O43298 467 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 TRPA1O75762 1119 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 GNAQP50148 359 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 APOBRQ0VD83 1088 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 CRHR2Q13324 411 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 KCTD1Q719H9 257 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 LZTS2Q9BRK4 669 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 FBXO28Q9NVF7 368 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 RABGAP1Q9Y3P9 1069 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 NID2Q14112 1375 aa20.31■□□□□ 0.84
TRAM1-203ENST00000520700 BCRP11274 1271 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 AK2P54819 239 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 POTEEQ6S8J3 1075 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 RASGRP2Q7LDG7 609 aa20.3■□□□□ 0.84
TRAM1-203ENST00000520700 CTCFLQ8NI51 663 aaPredicted RBP20.3■□□□□ 0.84
TRAM1-203ENST00000520700 SMCR8Q8TEV9 937 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms