RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TTC6Q86TZ1 520 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 TSPYL5Q86VY4 417 aaPredicted RBP6.51□□□□□ -1.37
SQLE-204ENST00000520493 NKD1Q969G9 470 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 SPON2Q9BUD6 331 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 NT5C1AQ9BXI3 368 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 TMPRSS5Q9H3S3 457 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 EHMT1Q9H9B1 1298 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 METTL5Q9NRN9 209 aaKnown RBP6.51□□□□□ -1.37
SQLE-204ENST00000520493 UBP1Q9NZI7 540 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 TMEM59LQ9UK28 342 aa6.51□□□□□ -1.37
SQLE-204ENST00000520493 DNAJA2O60884 412 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 SRFP11831 508 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 CRKP46108 304 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 EGR3Q06889 387 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 GAB4Q2WGN9 574 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 OVOS1Q6IE37 1185 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 USP48Q86UV5 1035 aa6.5□□□□□ -1.37
SQLE-204ENST00000520493 DHX38Q92620 1227 aaKnown RBP6.5□□□□□ -1.37
SQLE-204ENST00000520493 NUAK1O60285 661 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 LRRN2O75325 713 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 CCNFP41002 786 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 HK2P52789 917 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 KRTAP1-1Q07627 177 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 BACH2Q9BYV9 841 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 NSUN3Q9H649 340 aaKnown RBP6.49□□□□□ -1.37
SQLE-204ENST00000520493 KCNK12Q9HB15 430 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 PARD6AQ9NPB6 346 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 CD320Q9NPF0 282 aa6.49□□□□□ -1.37
SQLE-204ENST00000520493 DNAJC25-GNG10A0A024R161 153 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 TCAF2A6NFQ2 919 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 TCF3P15923 654 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 SYN1P17600 705 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 RALGPS1Q5JS13 557 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 CDCP2Q5VXM1 449 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 NLRC3Q7RTR2 1065 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 OXR1Q8N573 874 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 ABHD4Q8TB40 342 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 ENOX1Q8TC92 643 aaKnown RBP6.48□□□□□ -1.37
SQLE-204ENST00000520493 RNF34Q969K3 372 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 ZCCHC4Q9H5U6 513 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 C19orf73Q9NVV2 129 aa6.48□□□□□ -1.37
SQLE-204ENST00000520493 WASH4PA8MWX3 477 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 CLEC3AO75596 197 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 UBOX5O94941 541 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 IMPDH2P12268 514 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 FANCCQ00597 558 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 CLCQ05315 142 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 DUSP4Q13115 394 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 NMIQ13287 307 aaPredicted RBP6.47□□□□□ -1.37
SQLE-204ENST00000520493 SLITRK4Q8IW52 837 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 MYLIPQ8WY64 445 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 ATG4CQ96DT6 458 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 IRF2BPLQ9H1B7 796 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 CNNM2Q9H8M5 875 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
SQLE-204ENST00000520493 A0A0G2JLL6 359 aaPredicted RBP6.46□□□□□ -1.38
SQLE-204ENST00000520493 SSU72P8A0A1W2PR75 194 aa6.46□□□□□ -1.38
SQLE-204ENST00000520493 BMP7P18075 431 aa6.46□□□□□ -1.38
SQLE-204ENST00000520493 PDZD8Q8NEN9 1154 aa6.46□□□□□ -1.38
SQLE-204ENST00000520493 SYTL5Q8TDW5 730 aaPredicted RBP6.46□□□□□ -1.38
SQLE-204ENST00000520493 ADAMTS10Q9H324 1103 aa6.46□□□□□ -1.38
SQLE-204ENST00000520493 SMG5Q9UPR3 1016 aaKnown RBP6.46□□□□□ -1.38
SQLE-204ENST00000520493 FITM1A5D6W6 292 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 MEIS3P2A8K0S8 358 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 SCAMP3O14828 347 aaKnown RBP6.45□□□□□ -1.38
SQLE-204ENST00000520493 HPXP02790 462 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 POLR2BP30876 1174 aaKnown RBP6.45□□□□□ -1.38
SQLE-204ENST00000520493 KRTAP10-2P60368 255 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 CHRNEQ04844 493 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 LDLRAD1Q5T700 205 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 NBPF12Q5TAG4 269 aaPredicted RBP6.45□□□□□ -1.38
SQLE-204ENST00000520493 SPPL2CQ8IUH8 684 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 LILRA2Q8N149 483 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
SQLE-204ENST00000520493 FERD3LQ96RJ6 166 aa6.45□□□□□ -1.38
SQLE-204ENST00000520493 SHISA3A0PJX4 238 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 RECKO95980 971 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 NME1P15531 152 aaKnown RBP6.44□□□□□ -1.38
SQLE-204ENST00000520493 PCBP3P57721 371 aaKnown RBP6.44□□□□□ -1.38
SQLE-204ENST00000520493 ZNF394Q53GI3 561 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 RNF111Q6ZNA4 994 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 PRRT2Q7Z6L0 340 aaPredicted RBP6.44□□□□□ -1.38
SQLE-204ENST00000520493 ZNF655Q8N720 491 aaPredicted RBP6.44□□□□□ -1.38
SQLE-204ENST00000520493 VWCEQ96DN2 955 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 C8orf37Q96NL8 207 aa6.44□□□□□ -1.38
SQLE-204ENST00000520493 MKRN2Q9H000 416 aaKnown RBP6.44□□□□□ -1.38
SQLE-204ENST00000520493 RBAK-RBAKDNI3L0D1 243 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 ETV2O00321 342 aaPredicted RBP6.43□□□□□ -1.38
SQLE-204ENST00000520493 TNFRSF10CO14798 259 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 NBPF9Q3BBW0 867 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 ANKS4BQ8N8V4 417 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 DAGLBQ8NCG7 672 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 DHRS1Q96LJ7 313 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 HDAC8Q9BY41 377 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 ZNRF3Q9ULT6 936 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 PCDHGB7Q9Y5F8 929 aa6.43□□□□□ -1.38
SQLE-204ENST00000520493 LINC00310P59036 64 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 TEKQ02763 1124 aa6.42□□□□□ -1.38
SQLE-204ENST00000520493 NFIXQ14938 502 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms