RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 PDE4BQ07343 736 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 CCDC129Q6ZRS4 1044 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 SHCBP1Q8NEM2 672 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 CHMP4CQ96CF2 233 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 OGDHLQ9ULD0 1010 aa19.23■□□□□ 0.67
IGHV3-42-201ENST00000520410 ROBO3Q96MS0 1386 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 STRNO43815 780 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 FCER1AP12319 257 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 TMEM132BQ14DG7 1078 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 LRRC47Q8N1G4 583 aaKnown RBP19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 MMP19Q99542 508 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 RBM27Q9P2N5 1060 aaKnown RBP19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 A0A0G2JMZ2 1700 aa19.22■□□□□ 0.67
IGHV3-42-201ENST00000520410 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 SLC25A27O95847 323 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 SYN1P17600 705 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 PPARAQ07869 468 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 KCTD2Q14681 263 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 FAM47AQ5JRC9 791 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 ZMYM1Q5SVZ6 1142 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 ANO1Q5XXA6 986 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 SLF1Q9BQI6 1058 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 LNPKQ9C0E8 428 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 TOMM22Q9NS69 142 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 DDX20Q9UHI6 824 aaKnown RBP19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 PPP1R9AQ9ULJ8 1098 aa19.21■□□□□ 0.67
IGHV3-42-201ENST00000520410 F5H6K3 240 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 KLRC3Q07444 240 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 RILPL2Q969X0 211 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 KIFC2Q96AC6 838 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 EVI5LQ96CN4 794 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 NYAP2Q9P242 653 aa19.2■□□□□ 0.66
IGHV3-42-201ENST00000520410 VWA5AO00534 786 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 MSCO60682 206 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 NDUFB10O96000 172 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 HOXC6P09630 235 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 STAT3P40763 770 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 CEP95Q96GE4 821 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 MTMR7Q9Y216 660 aa19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 MKI67P46013 3256 aaKnown RBP19.19■□□□□ 0.66
IGHV3-42-201ENST00000520410 TSPY2A6NKD2 308 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 COBLO75128 1261 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 ZBED4O75132 1171 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 TTLL1O95922 423 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 PGK2P07205 417 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 PDE1AP54750 535 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 TFAP4Q01664 338 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 CTDSPL2Q05D32 466 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 HDAC1Q13547 482 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 LHX8Q68G74 356 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 SNRNP48Q6IEG0 339 aaKnown RBP19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 SENP6Q9GZR1 1112 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 STAP2Q9UGK3 403 aa19.18■□□□□ 0.66
IGHV3-42-201ENST00000520410 COPB2P35606 906 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 PRAMEF19Q5SWL8 479 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 OLFML2BQ68BL8 750 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 RIOX2Q8IUF8 465 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 STX8Q9UNK0 236 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 PFASO15067 1338 aa19.17■□□□□ 0.66
IGHV3-42-201ENST00000520410 ZNF236Q9UL36 1845 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 KBTBD13C9JR72 458 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 RANBP6O60518 1105 aaKnown RBP19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 CYBAP13498 195 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 MNX1P50219 401 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 ATN1P54259 1190 aaPredicted RBP19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 RRP12Q5JTH9 1297 aaKnown RBP19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 SLFN13Q68D06 897 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 ABRAQ8N0Z2 381 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 TRPV1Q8NER1 839 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 DDX11Q96FC9 970 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 MAML3Q96JK9 1138 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 SALL3Q9BXA9 1300 aa19.16■□□□□ 0.66
IGHV3-42-201ENST00000520410 GJC2Q5T442 439 aaPredicted RBP19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 TEX13BQ9BXU2 312 aa19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 COL11A1P12107 1806 aaPredicted RBP19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 RLFQ13129 1914 aa19.15■□□□□ 0.66
IGHV3-42-201ENST00000520410 GREB1LQ9C091 1923 aaPredicted RBP19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 BMP3P12645 472 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 LRRC26Q2I0M4 334 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 VPS53Q5VIR6 699 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 NEDD1Q8NHV4 660 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 EXOC6Q8TAG9 804 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 FAM227BQ96M60 508 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 HELLSQ9NRZ9 838 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 HOMER2Q9NSB8 354 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 FEM1BQ9UK73 627 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 ZNF214Q9UL59 606 aaPredicted RBP19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 PARP14Q460N5 1801 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 FRMPD3Q5JV73 1810 aa19.14■□□□□ 0.65
IGHV3-42-201ENST00000520410 MYH4Q9Y623 1939 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms