RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 HMGN5P82970 282 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 DNM1Q05193 864 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 COL9A3Q14050 684 aaPredicted RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 GRIK4Q16099 956 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 LRRFIP1Q32MZ4 808 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 NAA16Q6N069 864 aaPredicted RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 CDC37L1Q7L3B6 337 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 DHX32Q7L7V1 743 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 TTC6Q86TZ1 520 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 TRIM50Q86XT4 487 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 HOMEZQ8IX15 550 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 MICALL1Q8N3F8 863 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 FOXD4L4Q8WXT5 416 aaPredicted RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 ZNF274Q96GC6 653 aaPredicted RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 PHACTR1Q9C0D0 580 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 BRD7Q9NPI1 651 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 DDX19AQ9NUU7 478 aaKnown RBP5.94□□□□□ -1.46
SDC2-204ENST00000519914 PAG1Q9NWQ8 432 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 USP25Q9UHP3 1055 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 TAF6LQ9Y6J9 622 aa5.94□□□□□ -1.46
SDC2-204ENST00000519914 AHDC1Q5TGY3 1603 aaPredicted RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 RIC1Q4ADV7 1423 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 C4AP0C0L4 1744 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 C4BP0C0L5 1744 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 ADARB2-AS1A8MUL3 147 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 RNF113AO15541 343 aaKnown RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 RAD21O60216 631 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 PTCD1O75127 700 aaKnown RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 CAVIN2O95810 425 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 TPM3P06753 285 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 HSPD1P10809 573 aaKnown RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 ADH7P40394 386 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 CLDN10P78369 228 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 RSPO4Q2I0M5 234 aaPredicted RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 HSP90AB3PQ58FF7 597 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 TRAPPC3LQ5T215 181 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 TAF3Q5VWG9 929 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 STOX1Q6ZVD7 989 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 NECAB1Q8N987 351 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 ZNF280CQ8ND82 737 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 LEO1Q8WVC0 666 aaPredicted RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 BHMTQ93088 406 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 EDC3Q96F86 508 aaKnown RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 PRDM11Q9NQV5 511 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 TPSG1Q9NRR2 321 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 AKAP2Q9Y2D5 859 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 CHMP3Q9Y3E7 222 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 KIF3AQ9Y496 699 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 CHD4Q14839 1912 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 COL16A1Q07092 1604 aaPredicted RBP5.93□□□□□ -1.46
SDC2-204ENST00000519914 MAST3O60307 1309 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 ZMYM6O95789 1325 aa5.93□□□□□ -1.46
SDC2-204ENST00000519914 TIAM2Q8IVF5 1701 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 BCL9O00512 1426 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 A0A1B0GUL7 405 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 FIBPO43427 364 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 A1BGP04217 495 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 CCDC192P0DO97 292 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 PSMA6P60900 246 aaKnown RBP5.92□□□□□ -1.46
SDC2-204ENST00000519914 SCRN1Q12765 414 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 Q6ZUG5 572 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 TOM1L2Q6ZVM7 507 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 ZBTB38Q8NAP3 1195 aaPredicted RBP5.92□□□□□ -1.46
SDC2-204ENST00000519914 TSEN2Q8NCE0 465 aaKnown RBP5.92□□□□□ -1.46
SDC2-204ENST00000519914 NSUN7Q8NE18 718 aaKnown RBP5.92□□□□□ -1.46
SDC2-204ENST00000519914 FAM200AQ8TCP9 573 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 ADAMTS19Q8TE59 1207 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 MDFIQ99750 246 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 CLSTN2Q9H4D0 955 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 SPTLC3Q9NUV7 552 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 SLAIN2Q9P270 581 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 RCOR1Q9UKL0 485 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 KCNH4Q9UQ05 1017 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 NRAPQ86VF7 1730 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 MAP3K15Q6ZN16 1313 aa5.92□□□□□ -1.46
SDC2-204ENST00000519914 MYO5AQ9Y4I1 1855 aaKnown RBP5.92□□□□□ -1.46
SDC2-204ENST00000519914 PHLPP1O60346 1717 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 SCO2A0A1W2PP80 73 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 VPS37CA5D8V6 355 aaPredicted RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 USP17L3A6NCW0 530 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 USP17L4A6NCW7 530 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 ERVV-1B6SEH8 477 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 E7EWF7 191 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 GOLIM4O00461 696 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 CTAGE5O15320 804 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 FOXP2O15409 715 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 PPP1R12BO60237 982 aaPredicted RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 LGR5O75473 907 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 CTDNEP1O95476 244 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 ADCY5O95622 1261 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 IFIT1P09914 478 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 BRD2P25440 801 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 PIP4K2AP48426 406 aaPredicted RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 ATP1A2P50993 1020 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 MAP3K11Q16584 847 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 LRRC24Q50LG9 513 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 USP17L2Q6R6M4 530 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 CCDC129Q6ZRS4 1044 aa5.91□□□□□ -1.46
SDC2-204ENST00000519914 DDX46Q7L014 1031 aaKnown RBP5.91□□□□□ -1.46
SDC2-204ENST00000519914 USP17L1Q7RTZ2 530 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms