RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 HOXD10P28358 340 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-213ENST00000519848 CERKLQ49MI3 558 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-213ENST00000519848 USP17L2Q6R6M4 530 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 CATSPERGQ6ZRH7 1159 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 CLASRPQ8N2M8 674 aaKnown RBP10.48□□□□□ -0.73
PABPC1-213ENST00000519848 TBC1D2Q9BYX2 928 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 RPAP3Q9H6T3 665 aaPredicted RBP10.48□□□□□ -0.73
PABPC1-213ENST00000519848 SALL3Q9BXA9 1300 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 LCTP09848 1927 aa10.48□□□□□ -0.73
PABPC1-213ENST00000519848 PLXNA1Q9UIW2 1896 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 MYH4Q9Y623 1939 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 C19orf81C9J6K1 198 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 IFIT2P09913 472 aaKnown RBP10.47□□□□□ -0.73
PABPC1-213ENST00000519848 UBXN2AP68543 259 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 RASGRP2Q7LDG7 609 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 SPICE1Q8N0Z3 855 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 NKX2-3Q8TAU0 364 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 OSBP2Q969R2 916 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 COA7Q96BR5 231 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 ATG4CQ96DT6 458 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 FEZ1Q99689 392 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
PABPC1-213ENST00000519848 USP17L12C9JPN9 530 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 USP17L21D6R901 530 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 RBAK-RBAKDNI3L0D1 243 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 RAB11FIP3O75154 756 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 C12orf60Q5U649 245 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 CTR9Q6PD62 1173 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 LBX2Q6XYB7 198 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 STK11IPQ8N1F8 1099 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 GPRC5AQ8NFJ5 357 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 PI4K2BQ8TCG2 481 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 LRCH3Q96II8 777 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 SEC62Q99442 399 aaKnown RBP10.46□□□□□ -0.73
PABPC1-213ENST00000519848 MOV10L1Q9BXT6 1211 aaKnown RBP10.46□□□□□ -0.73
PABPC1-213ENST00000519848 CRNKL1Q9BZJ0 848 aaKnown RBP10.46□□□□□ -0.73
PABPC1-213ENST00000519848 OGDHLQ9ULD0 1010 aa10.46□□□□□ -0.73
PABPC1-213ENST00000519848 ZMYND8Q9ULU4 1186 aaPredicted RBP10.46□□□□□ -0.73
PABPC1-213ENST00000519848 ROBO3Q96MS0 1386 aa10.46□□□□□ -0.74
PABPC1-213ENST00000519848 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 ZNFX1Q9P2E3 1918 aaKnown RBP10.45□□□□□ -0.74
PABPC1-213ENST00000519848 GSG1L2A8MUP6 293 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 COBLO75128 1261 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-213ENST00000519848 COL6A1P12109 1028 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 SYN1P17600 705 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 PTPREP23469 700 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 CDK8P49336 464 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 PDE3AQ14432 1141 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 GRB14Q14449 540 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 HSP90AB4PQ58FF6 505 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 TRAF7Q6Q0C0 670 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 C16orf86Q6ZW13 317 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 TTC6Q86TZ1 520 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 REPS2Q8NFH8 660 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 OXER1Q8TDS5 423 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 DPF3Q92784 378 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 NUP88Q99567 741 aaPredicted RBP10.45□□□□□ -0.74
PABPC1-213ENST00000519848 APBA2Q99767 749 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 TRIM34Q9BYJ4 488 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 DCTPP1Q9H773 170 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 GINM1Q9NU53 330 aa10.45□□□□□ -0.74
PABPC1-213ENST00000519848 RPTORQ8N122 1335 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L15C9J2P7 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 MPHOSPH10O00566 681 aaKnown RBP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 IGSF3O75054 1194 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 TFRCP02786 760 aaKnown RBP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 RASA1P20936 1047 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 CYP2C19P33261 490 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 FOSBP53539 338 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 MAP2K5Q13163 448 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 PABPC4Q13310 644 aaKnown RBP eCLIP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 TTF1Q15361 905 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 UBE3CQ15386 1083 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 LRRC26Q2I0M4 334 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 ANO1Q5XXA6 986 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 PLEKHH3Q7Z736 793 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 C7orf61Q8IZ16 206 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 LENG1Q96BZ8 264 aaPredicted RBP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 STRBPQ96SI9 672 aaKnown RBP10.44□□□□□ -0.74
PABPC1-213ENST00000519848 NUDT12Q9BQG2 462 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 LRRCC1Q9C099 1032 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 STAP2Q9UGK3 403 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 RABGAP1Q9Y3P9 1069 aa10.44□□□□□ -0.74
PABPC1-213ENST00000519848 MCM3APO60318 1980 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 IGKV6D-41A0A0C4DH26 115 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 HMMRO75330 724 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 XRCC5P13010 732 aaKnown RBP10.43□□□□□ -0.74
PABPC1-213ENST00000519848 CYBAP13498 195 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 EEF2P13639 858 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms