RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 HDAC8Q9BY41 377 aa8.14□□□□□ -1.11
VPS37A-205ENST00000519515 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
VPS37A-205ENST00000519515 MCOLN1Q9GZU1 580 aa8.14□□□□□ -1.11
VPS37A-205ENST00000519515 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.14□□□□□ -1.11
VPS37A-205ENST00000519515 GMIPQ9P107 970 aa8.14□□□□□ -1.11
VPS37A-205ENST00000519515 ATE1O95260 518 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 PDE6BP35913 854 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
VPS37A-205ENST00000519515 CIAPIN1Q6FI81 312 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 RNF111Q6ZNA4 994 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 TMC3Q7Z5M5 1100 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 AMIGO3Q86WK7 504 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 DAGLBQ8NCG7 672 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 SHISA4Q96DD7 197 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 G6PC3Q9BUM1 346 aa8.13□□□□□ -1.11
VPS37A-205ENST00000519515 MYOCOSA0A1B0GUC4 107 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 POLR2BP30876 1174 aaKnown RBP8.12□□□□□ -1.11
VPS37A-205ENST00000519515 CRKP46108 304 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 LINC00310P59036 64 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 NBPF9Q3BBW0 867 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 OVOS1Q6IE37 1185 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 TMEM132EQ6IEE7 984 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 WAPLQ7Z5K2 1190 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 SIRT2Q8IXJ6 389 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 TCTN2Q96GX1 697 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 FOXP3Q9BZS1 431 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 ZNF552Q9H707 407 aaPredicted RBP8.12□□□□□ -1.11
VPS37A-205ENST00000519515 GGT7Q9UJ14 662 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 ZMYM5Q9UJ78 669 aa8.12□□□□□ -1.11
VPS37A-205ENST00000519515 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 NOTOA8MTQ0 251 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 NUAK1O60285 661 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 DLG4P78352 724 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 SNW1Q13573 536 aaKnown RBP8.11□□□□□ -1.11
VPS37A-205ENST00000519515 CDCP2Q5VXM1 449 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 ATG4CQ96DT6 458 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 BCL2L13Q9BXK5 485 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 EHMT1Q9H9B1 1298 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 TCFL5Q9UL49 500 aa8.11□□□□□ -1.11
VPS37A-205ENST00000519515 PEX10O60683 326 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 PCBP3P57721 371 aaKnown RBP8.1□□□□□ -1.11
VPS37A-205ENST00000519515 CLCQ05315 142 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 SEZ6Q53EL9 994 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 GK5Q6ZS86 529 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 ZNF655Q8N720 491 aaPredicted RBP8.1□□□□□ -1.11
VPS37A-205ENST00000519515 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 CNNM2Q9H8M5 875 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 UBP1Q9NZI7 540 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 ADAMTS1Q9UHI8 967 aa8.1□□□□□ -1.11
VPS37A-205ENST00000519515 USP2O75604 605 aaPredicted RBP8.09□□□□□ -1.11
VPS37A-205ENST00000519515 MCM4P33991 863 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 RAD51AP2Q09MP3 1159 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 SLC14A2Q15849 920 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 ZNF326Q5BKZ1 582 aaKnown RBP8.09□□□□□ -1.11
VPS37A-205ENST00000519515 HS2ST1Q7LGA3 356 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 GIPC2Q8TF65 315 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 ZNF512BQ96KM6 892 aaPredicted RBP8.09□□□□□ -1.11
VPS37A-205ENST00000519515 SGPP1Q9BX95 441 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 IRF2BPLQ9H1B7 796 aa8.09□□□□□ -1.11
VPS37A-205ENST00000519515 TEX51A0A1B0GUA7 166 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 KRTAP9-7A8MTY7 169 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 FKTNO75072 461 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 SEMA7AO75326 666 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 CLEC3AO75596 197 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 EFEMP2O95967 443 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 SYPP08247 313 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 NLRC3Q7RTR2 1065 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 NLRX1Q86UT6 975 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 MAP6Q96JE9 813 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 PRDM14Q9GZV8 571 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 MINPP1Q9UNW1 487 aa8.08□□□□□ -1.12
VPS37A-205ENST00000519515 TMEM82A0PJX8 343 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 PRAMEF1O95521 474 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 KIR2DL1P43626 348 aaPredicted RBP8.07□□□□□ -1.12
VPS37A-205ENST00000519515 KIR2DL2P43627 348 aaPredicted RBP8.07□□□□□ -1.12
VPS37A-205ENST00000519515 APOBRQ0VD83 1088 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 MRPL58Q14197 206 aaKnown RBP8.07□□□□□ -1.12
VPS37A-205ENST00000519515 ADGRF1Q5T601 910 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 LILRA6Q6PI73 481 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 CEP128Q6ZU80 1094 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 REXO1Q8N1G1 1221 aaKnown RBP8.07□□□□□ -1.12
VPS37A-205ENST00000519515 ANTXR1Q9H6X2 564 aa8.07□□□□□ -1.12
VPS37A-205ENST00000519515 OR14I1A6ND48 311 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 NRDCO43847 1150 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 TTLL10Q6ZVT0 673 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 NKD1Q969G9 470 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 HHIPL1Q96JK4 782 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 GCM1Q9NP62 436 aa8.06□□□□□ -1.12
VPS37A-205ENST00000519515 SIGLEC6O43699 453 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 NME1P15531 152 aaKnown RBP8.05□□□□□ -1.12
VPS37A-205ENST00000519515 CCNFP41002 786 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 ZNF165P49910 485 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 BBS9Q3SYG4 887 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 TMEM192Q8IY95 271 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 CHST7Q9NS84 486 aa8.05□□□□□ -1.12
VPS37A-205ENST00000519515 CNOT6Q9ULM6 557 aaKnown RBP8.05□□□□□ -1.12
VPS37A-205ENST00000519515 LRRFIP1Q32MZ4 808 aaKnown RBP8.04□□□□□ -1.12
VPS37A-205ENST00000519515 CRTAC1Q9NQ79 661 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms