RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
VPS37A-205ENST00000519515 CHIC1Q5VXU3 224 aa30.36■■■□□ 2.45
VPS37A-205ENST00000519515 SENP3Q9H4L4 574 aaPredicted RBP26.98■■□□□ 1.91
VPS37A-205ENST00000519515 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
VPS37A-205ENST00000519515 FOXD1Q16676 465 aa25.14■■□□□ 1.62
VPS37A-205ENST00000519515 PLPPR3Q6T4P5 718 aa24.39■■□□□ 1.49
VPS37A-205ENST00000519515 PPP6R1Q9UPN7 881 aa23.74■■□□□ 1.39
VPS37A-205ENST00000519515 ADRA2BP18089 450 aa23.69■■□□□ 1.38
VPS37A-205ENST00000519515 PIAS4Q8N2W9 510 aaPredicted RBP23.55■■□□□ 1.36
VPS37A-205ENST00000519515 MSH5O43196 834 aa23.39■■□□□ 1.33
VPS37A-205ENST00000519515 POTEDQ86YR6 584 aa22.38■■□□□ 1.17
VPS37A-205ENST00000519515 MAPK8IP2Q13387 824 aaPredicted RBP21.69■■□□□ 1.06
VPS37A-205ENST00000519515 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
VPS37A-205ENST00000519515 PPP4R3CPQ6ZMV5 832 aa21.44■■□□□ 1.02
VPS37A-205ENST00000519515 DMRT2Q9Y5R5 561 aa21.44■■□□□ 1.02
VPS37A-205ENST00000519515 CNKSR2Q8WXI2 1034 aa20.95■□□□□ 0.94
VPS37A-205ENST00000519515 HOXD11P31277 338 aaPredicted RBP20.75■□□□□ 0.91
VPS37A-205ENST00000519515 NCBP3Q53F19 620 aaKnown RBP20.69■□□□□ 0.9
VPS37A-205ENST00000519515 RNF216Q9NWF9 866 aaPredicted RBP20.68■□□□□ 0.9
VPS37A-205ENST00000519515 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
VPS37A-205ENST00000519515 NPM3O75607 178 aaKnown RBP20.38■□□□□ 0.85
VPS37A-205ENST00000519515 KCNA4P22459 653 aa20.25■□□□□ 0.83
VPS37A-205ENST00000519515 RNF39Q9H2S5 420 aa19.99■□□□□ 0.79
VPS37A-205ENST00000519515 CACNB1Q02641 598 aaPredicted RBP19.95■□□□□ 0.78
VPS37A-205ENST00000519515 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
VPS37A-205ENST00000519515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.82■□□□□ 0.76
VPS37A-205ENST00000519515 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
VPS37A-205ENST00000519515 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
VPS37A-205ENST00000519515 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
VPS37A-205ENST00000519515 SLC4A1APQ9BWU0 796 aaKnown RBP19.17■□□□□ 0.66
VPS37A-205ENST00000519515 SPINK5Q9NQ38 1064 aaPredicted RBP19.07■□□□□ 0.64
VPS37A-205ENST00000519515 CAPN15O75808 1086 aa19.02■□□□□ 0.64
VPS37A-205ENST00000519515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
VPS37A-205ENST00000519515 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
VPS37A-205ENST00000519515 APLP2Q06481 763 aa18.87■□□□□ 0.61
VPS37A-205ENST00000519515 SAMD1Q6SPF0 538 aaPredicted RBP18.84■□□□□ 0.61
VPS37A-205ENST00000519515 MYCNP04198 464 aaPredicted RBP18.83■□□□□ 0.6
VPS37A-205ENST00000519515 DSG3P32926 999 aa18.83■□□□□ 0.6
VPS37A-205ENST00000519515 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
VPS37A-205ENST00000519515 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
VPS37A-205ENST00000519515 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
VPS37A-205ENST00000519515 ABCB7O75027 752 aa18.62■□□□□ 0.57
VPS37A-205ENST00000519515 ZBTB22O15209 634 aa18.61■□□□□ 0.57
VPS37A-205ENST00000519515 ATF5Q9Y2D1 282 aaPredicted RBP18.41■□□□□ 0.54
VPS37A-205ENST00000519515 POLA2Q14181 598 aa18.35■□□□□ 0.53
VPS37A-205ENST00000519515 ATXN8OSP0DMR3 200 aa18.18■□□□□ 0.5
VPS37A-205ENST00000519515 CSRNP3Q8WYN3 585 aa18.02■□□□□ 0.48
VPS37A-205ENST00000519515 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
VPS37A-205ENST00000519515 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
VPS37A-205ENST00000519515 RBM42Q9BTD8 480 aaKnown RBP17.93■□□□□ 0.46
VPS37A-205ENST00000519515 OSCARQ8IYS5 282 aa17.72■□□□□ 0.43
VPS37A-205ENST00000519515 FBLN2P98095 1184 aa17.66■□□□□ 0.42
VPS37A-205ENST00000519515 POTEHQ6S545 545 aa17.6■□□□□ 0.41
VPS37A-205ENST00000519515 AKT1S1Q96B36 256 aa17.6■□□□□ 0.41
VPS37A-205ENST00000519515 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
VPS37A-205ENST00000519515 CHRDL2Q6WN34 429 aa17.45■□□□□ 0.38
VPS37A-205ENST00000519515 REM2Q8IYK8 340 aaPredicted RBP17.45■□□□□ 0.38
VPS37A-205ENST00000519515 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
VPS37A-205ENST00000519515 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
VPS37A-205ENST00000519515 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
VPS37A-205ENST00000519515 ZNF692Q9BU19 519 aaPredicted RBP17.31■□□□□ 0.36
VPS37A-205ENST00000519515 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
VPS37A-205ENST00000519515 SSUH2Q9Y2M2 353 aa17.22■□□□□ 0.35
VPS37A-205ENST00000519515 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
VPS37A-205ENST00000519515 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
VPS37A-205ENST00000519515 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
VPS37A-205ENST00000519515 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
VPS37A-205ENST00000519515 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
VPS37A-205ENST00000519515 SPDYE4A6NLX3 237 aa16.88■□□□□ 0.29
VPS37A-205ENST00000519515 PRR29P0C7W0 189 aa16.82■□□□□ 0.28
VPS37A-205ENST00000519515 PRKAR2AP13861 404 aaKnown RBP16.82■□□□□ 0.28
VPS37A-205ENST00000519515 HAX1O00165 279 aa16.75■□□□□ 0.27
VPS37A-205ENST00000519515 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
VPS37A-205ENST00000519515 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
VPS37A-205ENST00000519515 SP7Q8TDD2 431 aaPredicted RBP16.62■□□□□ 0.25
VPS37A-205ENST00000519515 EVX2Q03828 476 aa16.56■□□□□ 0.24
VPS37A-205ENST00000519515 C19orf67A6NJJ6 358 aa16.48■□□□□ 0.23
VPS37A-205ENST00000519515 PROM2Q8N271 834 aa16.47■□□□□ 0.23
VPS37A-205ENST00000519515 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
VPS37A-205ENST00000519515 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
VPS37A-205ENST00000519515 FKBP8Q14318 412 aa16.33■□□□□ 0.2
VPS37A-205ENST00000519515 CD44P16070 742 aaKnown RBP16.3■□□□□ 0.2
VPS37A-205ENST00000519515 GABBR2O75899 941 aa16.2■□□□□ 0.18
VPS37A-205ENST00000519515 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
VPS37A-205ENST00000519515 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
VPS37A-205ENST00000519515 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
VPS37A-205ENST00000519515 MIER1Q8N108 512 aa16.11■□□□□ 0.17
VPS37A-205ENST00000519515 PAK3O75914 559 aaPredicted RBP16.04■□□□□ 0.16
VPS37A-205ENST00000519515 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
VPS37A-205ENST00000519515 ZNF579Q8NAF0 562 aaKnown RBP16.03■□□□□ 0.16
VPS37A-205ENST00000519515 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
VPS37A-205ENST00000519515 CLCN6P51797 869 aa15.99■□□□□ 0.15
VPS37A-205ENST00000519515 PHF12Q96QT6 1004 aa15.91■□□□□ 0.14
VPS37A-205ENST00000519515 TSPYL2Q9H2G4 693 aaPredicted RBP15.9■□□□□ 0.14
VPS37A-205ENST00000519515 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
VPS37A-205ENST00000519515 GALR2O43603 387 aaPredicted RBP15.84■□□□□ 0.13
VPS37A-205ENST00000519515 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
VPS37A-205ENST00000519515 DCBLD2Q96PD2 775 aa15.82■□□□□ 0.12
VPS37A-205ENST00000519515 ZBTB47Q9UFB7 747 aaPredicted RBP15.82■□□□□ 0.12
VPS37A-205ENST00000519515 RASEFQ8IZ41 740 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms