RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SPATA20Q8TB22 786 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 HVCN1Q96D96 273 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 MRC1P22897 1456 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 C5orf60A6NFR6 353 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 ATP2C2O75185 946 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 ITIH3Q06033 890 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 SLMAPQ14BN4 828 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 FKBP15Q5T1M5 1219 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 HAUS3Q68CZ6 603 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 HIBCHQ6NVY1 386 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 ZNF662Q6ZS27 426 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 MFN1Q8IWA4 741 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 RPUSD2Q8IZ73 545 aaKnown RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 CCT6BQ92526 530 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 L3MBTL3Q96JM7 780 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 PAIP2Q9BPZ3 127 aaKnown RBP15.13■□□□□ 0.01
PABPC1-208ENST00000519004 STIM2Q9P246 746 aa15.13■□□□□ 0.01
PABPC1-208ENST00000519004 NCKAP5LQ9HCH0 1330 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 A6NHS1 94 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 CCT6AP40227 531 aaKnown RBP15.12■□□□□ 0.01
PABPC1-208ENST00000519004 ZNF526Q8TF50 670 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-208ENST00000519004 L3MBTL1Q9Y468 752 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 HMGB1P1B2RPK0 211 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-208ENST00000519004 POLR2DO15514 142 aaKnown RBP15.12■□□□□ 0.01
PABPC1-208ENST00000519004 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 TRAPPC3O43617 180 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 RIPK1Q13546 671 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 BLMHQ13867 455 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 TRIM74Q86UV6 250 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 TRIM73Q86UV7 250 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 ZNF513Q8N8E2 541 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-208ENST00000519004 SPATA4Q8NEY3 305 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 P3H4Q92791 437 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 AIFM3Q96NN9 605 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 CHPF2Q9P2E5 772 aa15.12■□□□□ 0.01
PABPC1-208ENST00000519004 KDRP35968 1356 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 WDR17Q8IZU2 1322 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 SH3TC1Q8TE82 1336 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 RCCD1A6NED2 376 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 IDEP14735 1019 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 TRIM14Q14142 442 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 RAB11FIP4Q86YS3 637 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 KAZALD1Q96I82 304 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 DSCC1Q9BVC3 393 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 KDM4CQ9H3R0 1056 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 JADE2Q9NQC1 790 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 SLC5A4Q9NY91 659 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 C9orf78Q9NZ63 289 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-208ENST00000519004 H7C1W4 665 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 NEFHP12036 1026 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 EIF2S2P20042 333 aaKnown RBP15.11■□□□□ 0.01
PABPC1-208ENST00000519004 GRIN1Q05586 938 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 CACNA2D3Q8IZS8 1091 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-208ENST00000519004 KRI1Q8N9T8 703 aaKnown RBP15.11■□□□□ 0.01
PABPC1-208ENST00000519004 CCHCR1Q8TD31 782 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 LACRTQ9GZZ8 138 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
PABPC1-208ENST00000519004 AKAP12Q02952 1782 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 GOLGA8BA8MQT2 603 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 ACTN4O43707 911 aaKnown RBP15.1■□□□□ 0.01
PABPC1-208ENST00000519004 FAM153BP0C7A2 387 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
PABPC1-208ENST00000519004 KRT31Q15323 416 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 PPP1R7Q15435 360 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 FAM153CQ494X1 144 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 IL17REQ8NFR9 667 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 CNKSR1Q969H4 720 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 SUCLG2Q96I99 432 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.1■□□□□ 0.012e-6■■■□□ 15.6
PABPC1-208ENST00000519004 LMCD1Q9NZU5 365 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 FAM153AQ9UHL3 310 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 SNX12Q9UMY4 172 aa15.1■□□□□ 0.01
PABPC1-208ENST00000519004 KLF18A0A0U1RQI7 1052 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 CLSTN1O94985 981 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 MREGQ8N565 214 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 AGAP11Q8TF27 550 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 EZH1Q92800 747 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 PURBQ96QR8 312 aaKnown RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 NDST4Q9H3R1 872 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 NOP53Q9NZM5 478 aaKnown RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 SLC12A6Q9UHW9 1150 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 MST1RQ04912 1400 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 C4BP0C0L5 1744 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 N4BP3O15049 544 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 KRT86O43790 486 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 ABL2P42684 1182 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 ROR2Q01974 943 aaKnown RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 LAMB3Q13751 1172 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 TMX4Q9H1E5 349 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 LIMA1Q9UHB6 759 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms