RNA–Protein interactions for RNA: ENST00000517373.1

EBF1-203, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 2,277 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-203ENST00000517373 LMNTD2Q8IXW0 634 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 SLC15A3Q8IY34 581 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 MYCBPAPQ8TBZ2 947 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 SH3GL1Q99961 368 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 TCHPQ9BT92 498 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 FAM192AQ9GZU8 254 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 EHD4Q9H223 541 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 SSUH2Q9Y2M2 353 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 NPHP4O75161 1426 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 PTCH1Q13635 1447 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 MYO3AQ8NEV4 1616 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 UBR1Q8IWV7 1749 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 A0A1B0GVL5 298 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 EIF3FO00303 357 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 WDR46O15213 610 aaKnown RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 TBC1D12O60347 775 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 PPP1R37O75864 691 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 CCT8P50990 548 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 APBA1Q02410 837 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 NSUN2Q08J23 767 aaKnown RBP eCLIP8.59□□□□□ -1.03
EBF1-203ENST00000517373 PTGISQ16647 500 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 ZMYM1Q5SVZ6 1142 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 Q6ZUG5 572 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 TMEM139Q8IV31 216 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 RPAP2Q8IXW5 612 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 FNBP4Q8N3X1 1017 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 ZSCAN31Q96LW9 406 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 CCT8L2Q96SF2 557 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 UPF3BQ9BZI7 483 aaKnown RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 ARHGEF10LQ9HCE6 1279 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
EBF1-203ENST00000517373 BAIAP2L1Q9UHR4 511 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 PPME1Q9Y570 386 aa8.59□□□□□ -1.03
EBF1-203ENST00000517373 GOLGA6L10A0A0M3HER8 536 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 HMGB1P1B2RPK0 211 aaPredicted RBP8.58□□□□□ -1.04
EBF1-203ENST00000517373 DNM1LO00429 736 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 NR1I2O75469 434 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 SSBP05455 408 aaKnown RBP eCLIP8.58□□□□□ -1.04
EBF1-203ENST00000517373 USP14P54578 494 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 AKAP17AQ02040 695 aaKnown RBP8.58□□□□□ -1.04
EBF1-203ENST00000517373 POTEHQ6S545 545 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 NLRP14Q86W24 1093 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 SIRT2Q8IXJ6 389 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 IRGQQ8WZA9 623 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 NCSTNQ92542 709 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 KIFAP3Q92845 792 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 SPATA32Q96LK8 384 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 ESYT1Q9BSJ8 1104 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 OSBPL7Q9BZF2 842 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 VCXQ9H320 206 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
EBF1-203ENST00000517373 L3MBTL1Q9Y468 752 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 N6AMT1Q9Y5N5 214 aa8.58□□□□□ -1.04
EBF1-203ENST00000517373 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
EBF1-203ENST00000517373 CHD2O14647 1828 aaKnown RBP8.58□□□□□ -1.04
EBF1-203ENST00000517373 E7ENQ6 273 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 P4HA2O15460 535 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 PPLO60437 1756 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 USO1O60763 962 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 BAG3O95817 575 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 KCNA2P16389 499 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 HOXD12P35452 270 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 ARPC4P59998 168 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 IFI16Q16666 785 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 FAAH2Q6GMR7 532 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 PPP4R3AQ6IN85 833 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 ARHGEF25Q86VW2 580 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 AOPEPQ8N6M6 819 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 TAF4BQ92750 862 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 DDX12PQ92771 950 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 IFT43Q96FT9 208 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 RABEP2Q9H5N1 569 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 HELLSQ9NRZ9 838 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 IFNKQ9P0W0 207 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 CEP170BQ9Y4F5 1589 aaPredicted RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 TTLL3Q9Y4R7 772 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 CTAGE9A4FU28 777 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 TMEM247A6NEH6 219 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 GFPT2O94808 682 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 CSB-PGBD3P0DP91 1061 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 HOXD10P28358 340 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 IRF5Q13568 498 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 RCN1Q15293 331 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 DZIP1Q86YF9 867 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 CTNNBL1Q8WYA6 563 aaPredicted RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 NAF1Q96HR8 494 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 FGD4Q96M96 766 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 NDST4Q9H3R1 872 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 PUF60Q9UHX1 559 aaKnown RBP8.57□□□□□ -1.04
EBF1-203ENST00000517373 STK24Q9Y6E0 443 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 NEURL4Q96JN8 1562 aa8.57□□□□□ -1.04
EBF1-203ENST00000517373 ADAMTS13Q76LX8 1427 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms