RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 RSRP1Q9BUV0 290 aa4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 SGPP1Q9BX95 441 aa4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 LRRC3Q9BY71 257 aa4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 XYLT2Q9H1B5 865 aa4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 EPB41L4AQ9HCS5 686 aaPredicted RBP4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 JAG2Q9Y219 1238 aa4.3□□□□□ -1.72
SNORA40.15-201ENST00000516884 RFXAPO00287 272 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 FOXD2O60548 495 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 UBOX5O94941 541 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 BMP7P18075 431 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 PDE6BP35913 854 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 MPP2Q14168 576 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 BBS9Q3SYG4 887 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 DIEXFQ68CQ4 756 aaKnown RBP4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 REC114Q7Z4M0 266 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 ZNF655Q8N720 491 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 LINC00116Q8NCU8 138 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 CXorf38Q8TB03 319 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 SYTL4Q96C24 671 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 HHIPL1Q96JK4 782 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 SIGLEC10Q96LC7 697 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 TRAIPQ9BWF2 469 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 ZCCHC4Q9H5U6 513 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 CNTD2Q9H8S5 307 aa4.29□□□□□ -1.72
SNORA40.15-201ENST00000516884 PATL2C9JE40 543 aaKnown RBP4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 ATE1O95260 518 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 PNLIPP16233 465 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 TNNI2P48788 182 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 CEBPAP49715 358 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 GALK1P51570 392 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 ERVFRD-1P60508 538 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 RNF4P78317 190 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 PSMD2Q13200 908 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 DNAJC14Q6Y2X3 702 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 FBXO33Q7Z6M2 555 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 TCTN2Q96GX1 697 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 KIF2CQ99661 725 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
SNORA40.15-201ENST00000516884 SLC22A31A6NKX4 558 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 N4BP3O15049 544 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 GRIN3BO60391 1043 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 USP2O75604 605 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 PI3P19957 117 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 VIPR1P32241 457 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 EPHB3P54753 998 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 NFIXQ14938 502 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 CLEC16AQ2KHT3 1053 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 NBPF9Q3BBW0 867 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 ADGRF1Q5T601 910 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 NBPF12Q5TAG4 269 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 FAM196AQ6ZSG2 479 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 SND1Q7KZF4 910 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 FOXP3Q9BZS1 431 aa4.27□□□□□ -1.73
SNORA40.15-201ENST00000516884 F6X3S4 739 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 SYN1P17600 705 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 SRSF3P84103 164 aaKnown RBP4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 PWP1Q13610 501 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 CDCP2Q5VXM1 449 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 TMEM132EQ6IEE7 984 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 ERMP1Q7Z2K6 904 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 TMC3Q7Z5M5 1100 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 TMEFF1Q8IYR6 380 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 PHACTR4Q8IZ21 702 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 FBXO27Q8NI29 283 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 PANK1Q8TE04 598 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 PLCD4Q9BRC7 762 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 GMIPQ9P107 970 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 TCFL5Q9UL49 500 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 IRAK3Q9Y616 596 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 ROBO2Q9HCK4 1378 aa4.26□□□□□ -1.73
SNORA40.15-201ENST00000516884 FADS2P1A8MWK0 482 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 ABLIM1O14639 778 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 SIGLEC6O43699 453 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 GREM1O60565 184 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 RPL10P27635 214 aaKnown RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 CCNFP41002 786 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 AFF3P51826 1226 aaKnown RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 CDR1P51861 262 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 PCBP3P57721 371 aaKnown RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 NFKB2Q00653 900 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 CAP1Q01518 475 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 SNW1Q13573 536 aaKnown RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 SKOR2Q2VWA4 1001 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 CEP128Q6ZU80 1094 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 WAPLQ7Z5K2 1190 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 SLCO6A1Q86UG4 719 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 FCRL2Q96LA5 508 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 ASCC2Q9H1I8 757 aaPredicted RBP4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 CNNM2Q9H8M5 875 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 EHMT1Q9H9B1 1298 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 TNFRSF10DQ9UBN6 386 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 ADAMTS20P59510 1910 aa4.25□□□□□ -1.73
SNORA40.15-201ENST00000516884 OTOL1A6NHN0 477 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.15-201ENST00000516884 PRAMEF1O95521 474 aa4.24□□□□□ -1.73
SNORA40.15-201ENST00000516884 GBP2P32456 591 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.15-201ENST00000516884 RAD51AP2Q09MP3 1159 aa4.24□□□□□ -1.73
SNORA40.15-201ENST00000516884 CBX2Q14781 532 aaPredicted RBP4.24□□□□□ -1.73
SNORA40.15-201ENST00000516884 ARSHQ5FYA8 562 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms